Pairwise Alignments

Query, 591 a.a., putative acyl-CoA dehydrogenase from Pseudomonas putida KT2440

Subject, 617 a.a., 3-methylmercaptopropionyl-CoA dehydrogenase (DmdC) from Variovorax sp. SCN45

 Score =  320 bits (820), Expect = 1e-91
 Identities = 216/595 (36%), Positives = 304/595 (51%), Gaps = 46/595 (7%)

Query: 33  RDTLDGILEEAARFTGQIIAPLNRNSDEQGCQWVGGEVTTPDGMRDAYRQYVEHGWASMT 92
           R+T D +L+   R   +  AP NR  D Q   + G +V  P    DA++ +VE G  S  
Sbjct: 31  RETFDAVLDICERIAREKYAPFNRTVDTQEPHFDGEKVILPQATHDAHKAFVESGMMSAA 90

Query: 93  GPQAYGGQGLPQMASASFHEMLMAASLSFRIYSGLTEGAVLALHRHGSEPLKQAYLSRMV 152
                GG  LP    A+ +     AS+S    + LT G    L  HG++  K  +     
Sbjct: 91  QDYDIGGMQLPYTMQAAANSFFAMASVSIGS-NMLTSGNANLLMVHGTDMQKNVFAKNEF 149

Query: 153 SGEWAGTMCLTEPQAGTDLALLRTRAQPEADG--------SYRITGSKIFISGGEQDLTD 204
           SG WAGTMCL+EPQAG+ L+ + TRA P+ +G         YR+TG+K++IS G+ +LT+
Sbjct: 150 SGRWAGTMCLSEPQAGSSLSDVATRAVPDGEGFQDDPLGPRYRLTGNKMWISAGDHELTE 209

Query: 205 NIVHLVLARLPDAPA----GVRGISLFLVPKLLPG------GERNALGCGALEHKMGIKG 254
           NIVH+VLA++PD       G RGISLF+VPK +        G+RN +    L HK+G +G
Sbjct: 210 NIVHIVLAKIPDENGKLVPGTRGISLFIVPKRMVDTKGKLTGQRNDVALAGLNHKLGWRG 269

Query: 255 ASTCVMNFD----------GAQGWLVGEANQGLACMFTMMNDARFQVGLQGLGIAEAAFQ 304
            +  ++NF           GA G+LVGE  +GL CMF MMN+AR  VG     +  A + 
Sbjct: 270 TTNTLLNFGEGKYPVDGKAGAVGYLVGEPGKGLHCMFHMMNEARIGVGTAATMLGMAGYH 329

Query: 305 GGLAYARERLQSRSL-----AGPVAAEKPADP---IIVHPDVRRMLLTQKTLTEGCRMLG 356
             L YA+ R Q R +     AG   A+  A P   II H DVRRMLL QK   EG   L 
Sbjct: 330 ASLEYAKTRPQGRLVKKPQAAGTAVAKDSAAPQVRIIEHADVRRMLLAQKAYCEGALALE 389

Query: 357 IYTARQLDLEHAAKSAPARQAAARRAALLIPIVKAFFTDVGQEVASLGVQVYGGHGYIRE 416
           +Y AR +D E     A A   A     +L PI K++ ++   E  SL +QV+GG+GY R+
Sbjct: 390 LYCARLVD-EQKTGDAQAADDARLLLEVLTPIAKSWPSEWCLEANSLAIQVHGGYGYTRD 448

Query: 417 WGMEQLMRDSRITQLYEGTNGIQALDLIRRKVLGDGGAELNLLIDEMAPHVRAANALGGL 476
           + +EQ  RD+R+  ++EGT+GIQA DL+ RKVL + G  L LL   M   + +A  +  L
Sbjct: 449 FPVEQYWRDNRLNMIHEGTHGIQAADLLGRKVLMEKGRGLQLLAGRMTATIASAAKVPAL 508

Query: 477 QAMATGVGQRLEEWRALSGHVVEAC--ERDPQESGAVSVDFLAYSAYVLLAAMWLQAAVR 534
            A A  +G  L+      G   EA     DP ++ A +V ++    + +LA +WL  A R
Sbjct: 509 AAHAKALGAALQR----IGSATEAAWFTGDPADALANAVPYMQAFGHTVLAWIWLDVARR 564

Query: 535 AQATLATGSAETAFYRAKLDAATFYWRRILPRATAHREALLGGADCLMALPASDF 589
           A      G    A    K+ A  +++   LP+  A    +        ALP   F
Sbjct: 565 ALE--KDGEKARAVTAGKIGATDYFFHYELPKIGAWLNVVETRDPTCTALPEDAF 617