Pairwise Alignments

Query, 591 a.a., putative acyl-CoA dehydrogenase from Pseudomonas putida KT2440

Subject, 573 a.a., 3-methylmercaptopropionyl-CoA dehydrogenase (DmdC) from Sphingobium sp. HT1-2

 Score =  434 bits (1116), Expect = e-126
 Identities = 256/595 (43%), Positives = 351/595 (58%), Gaps = 28/595 (4%)

Query: 1   MNYQAPLRDMRFVLHELFDLSGHCQQLGIELDR-DTLDGILEEAARFTGQIIAPLNRNSD 59
           M+++ PL +  FVL  + ++ G            + ++ +L+E+A+   Q+ APLN+  D
Sbjct: 1   MSFRVPLVEQLFVLETIANIEGIASLPAFTAATPELIEAVLDESAKLAEQVFAPLNKIGD 60

Query: 60  EQGCQWVGGEVTTPDGMRDAYRQYVEHGWASMTGPQAYGGQGLPQMASASFHEMLMAASL 119
            +G  W  GEV+ PDG   A+RQYV  GW S+     +GGQGLP + + +  E L AA++
Sbjct: 61  IEGSVWRNGEVSLPDGYASAFRQYVAGGWGSLGSDPRWGGQGLPFVLALAVQEQLTAANM 120

Query: 120 SFRIYSGLTEGAVLALHRHGSEPLKQAYLSRMVSGEWAGTMCLTEPQAGTDLALLRTRAQ 179
           +F +   LT GA+ AL  H S+ L   YL+++VSGEW GTM LTEPQAG+D+  LRTRA+
Sbjct: 121 AFALNMMLTLGAIEALQSHASDDLNALYLTKLVSGEWTGTMNLTEPQAGSDVGALRTRAE 180

Query: 180 PEADGSYRITGSKIFISGGEQDLTDNIVHLVLARLPDAPAGVRGISLFLVPKLLPGGERN 239
           P ADG++RI GSKIFI+ GE DL +NIVHLVLAR P +PAG +GISLFLVPK L  G RN
Sbjct: 181 PAADGTWRIKGSKIFITWGEHDLAENIVHLVLARTPGSPAGTKGISLFLVPKFLEDGVRN 240

Query: 240 ALGCGALEHKMGIKGASTCVMNF---DGAQGWLVGEANQGLACMFTMMNDARFQVGLQGL 296
            L C ++EHK+GI  + TC M+F   DG  G++VG  N G+  MFTMMN AR  VGLQG+
Sbjct: 241 DLRCVSIEHKLGIHASPTCTMSFGDADGCVGYMVGAENGGMRAMFTMMNHARINVGLQGV 300

Query: 297 GIAEAAFQGGLAYARERLQSRSLAGPVAAEKPADPIIVHPDVRRMLLTQKTLTEGCRMLG 356
           GIAE A+Q  L YARER+Q                II +PDVRRM+LT +  TE  R L 
Sbjct: 301 GIAERAYQAALGYARERVQGLR-------------IIDYPDVRRMILTMRATTEAIRALA 347

Query: 357 IYTARQLDLEHAAKSAPARQAAARRAALLIPIVKAFFTDVGQEVASLGVQVYGGHGYIRE 416
            + A  +D  H+  +      A   A LL P+ KA+ TD+G EVASLG+QV+GG G+I E
Sbjct: 348 YFNAAAVDRGHSGDA-----QAQMLADLLTPVTKAYATDMGVEVASLGIQVFGGMGFIEE 402

Query: 417 WGMEQLMRDSRITQLYEGTNGIQALDLIRRKVLGDGGAELNLLIDEMAPHVRAANALGGL 476
            G  Q  RD+RI  +YEGTNGIQA+DL+ RK L  G  E   L  E+A  +  A A    
Sbjct: 403 TGAAQHFRDARIAPIYEGTNGIQAMDLVGRK-LRQGRWE--ALFAEIATEIDLAGATPET 459

Query: 477 QAMATGVGQRLEEWRALSGHVVEACERDPQESGAVSVDFLAYSAYVLLAAMWLQAAVRAQ 536
            A+   +   L      +  +++  + D Q+  A +  +L     ++   +  + A  A 
Sbjct: 460 AALQAPLEAALSALTHATKWMLD--QSDAQDVTAGASPYLRMFGILMGGYLLARQARIAC 517

Query: 537 ATLATGSAET-AFYRAKLDAATFYWRRILPRATAHREALLGGADCLMALPASDFA 590
             +A G+A+   F R K+  A+F+  +ILP+A A   A   GA  L A+    FA
Sbjct: 518 ERIAGGTADNLPFLRTKIATASFFITQILPQAGALLSAATAGAAPLYAISEDQFA 572