Pairwise Alignments

Query, 591 a.a., putative acyl-CoA dehydrogenase from Pseudomonas putida KT2440

Subject, 596 a.a., Acyl-CoA dehydrogenase 2 [fadN-fadA-fadE operon] (EC 1.3.8.7) from Sphingobium sp. HT1-2

 Score =  576 bits (1484), Expect = e-168
 Identities = 296/589 (50%), Positives = 387/589 (65%), Gaps = 8/589 (1%)

Query: 3   YQAPLRDMRFVLHELF--DLSGHCQQLGIELDRDTLDGILEEAARFTGQIIAPLNRNSDE 60
           Y APLRDMRFVL+EL   D  G    L  E   D  D ILEEAARF   ++ P+NR+ DE
Sbjct: 4   YDAPLRDMRFVLNELHADDGFGDIPALS-EFTPDLTDAILEEAARFCRDVLLPINRSGDE 62

Query: 61  QGCQWVGGEVTTPDGMRDAYRQYVEHGWASMTGPQAYGGQGLPQMASASFHEMLMAASLS 120
           +GC    G V TP G  +AY+Q+ E GW ++     +GGQGLP+  +    EM+ +++LS
Sbjct: 63  EGCHLENGVVRTPAGFPEAYKQFAEGGWTALASDPEWGGQGLPEAVNKLVEEMICSSNLS 122

Query: 121 FRIYSGLTEGAVLALHRHGSEPLKQAYLSRMVSGEWAGTMCLTEPQAGTDLALLRTRAQP 180
           F +Y GLT GA  A+  HGS+ LKQAYL +MVSG+W+GTMCLTEP  GTDL LLR+RA P
Sbjct: 123 FGLYPGLTHGATTAIEGHGSDALKQAYLPKMVSGQWSGTMCLTEPHCGTDLGLLRSRAVP 182

Query: 181 EADGSYRITGSKIFISGGEQDLTDNIVHLVLARLPDAPAGVRGISLFLVPKLLPG----- 235
           + DGSY++TGSKIFIS GE DLT+NI+HLVLARLPDAP GV+GISLFLVPK LP      
Sbjct: 183 QGDGSYKVTGSKIFISAGEHDLTENIIHLVLARLPDAPKGVKGISLFLVPKYLPREDGTP 242

Query: 236 GERNALGCGALEHKMGIKGASTCVMNFDGAQGWLVGEANQGLACMFTMMNDARFQVGLQG 295
           G+ N + C A+EHKMG+K ++TC MNFD + GW+VGE  +G+A MFTMMN  R  VG+QG
Sbjct: 243 GQSNGVACAAIEHKMGLKASATCQMNFDDSIGWIVGEPGKGMAAMFTMMNTERVSVGIQG 302

Query: 296 LGIAEAAFQGGLAYARERLQSRSLAGPVAAEKPADPIIVHPDVRRMLLTQKTLTEGCRML 355
           LG+ EAA+Q    YA++R+Q R+L+GP   ++ ADPIIVHPDVRRML+T +   EGCR L
Sbjct: 303 LGVGEAAYQAAAWYAKDRIQGRALSGPKYPDQAADPIIVHPDVRRMLMTMRAYNEGCRAL 362

Query: 356 GIYTARQLDLEHAAKSAPARQAAARRAALLIPIVKAFFTDVGQEVASLGVQVYGGHGYIR 415
             + +R LD E  +     RQ A+   AL+ P+VKA FTD+  + A+L VQ YGGHGYIR
Sbjct: 363 SAWVSRALDAEKHSPEPEVRQRASDFIALMTPVVKALFTDLAFDSANLAVQCYGGHGYIR 422

Query: 416 EWGMEQLMRDSRITQLYEGTNGIQALDLIRRKVLGDGGAELNLLIDEMAPHVRAANALGG 475
           E G+EQ  RD+RIT +YEGTNG+QALDL+ RK+    G  L      ++  +   N  G 
Sbjct: 423 ESGVEQYARDARITMIYEGTNGVQALDLVGRKLGAHMGRYLRSFFHPVSAFIEENNVDGP 482

Query: 476 LQAMATGVGQRLEEWRALSGHVVEACERDPQESGAVSVDFLAYSAYVLLAAMWLQAAVRA 535
           ++ M   + +     +  +  V +   +DP+E+GA S D+L     V +   + +A   A
Sbjct: 483 MKPMIEALAKAFGALQLSTATVAQRALKDPEEAGAASADYLRLMGLVAMGYCFAKATKIA 542

Query: 536 QATLATGSAETAFYRAKLDAATFYWRRILPRATAHREALLGGADCLMAL 584
              L  GS +  FY AK+  ATF++ RILP+ATA   A+  G   LMAL
Sbjct: 543 GLQLFFGSEDKRFYDAKIKTATFFFERILPQATASFLAIKAGKKSLMAL 591