Pairwise Alignments

Query, 591 a.a., putative acyl-CoA dehydrogenase from Pseudomonas putida KT2440

Subject, 606 a.a., 3-methylmercaptopropionyl-CoA dehydrogenase from Azospirillum sp. SherDot2

 Score =  430 bits (1106), Expect = e-125
 Identities = 265/597 (44%), Positives = 348/597 (58%), Gaps = 22/597 (3%)

Query: 3   YQAPLRDMRFVLHELFDLSGHCQQLGIE-LDRDTLDGILEEAARFTGQIIAPLNRNSDEQ 61
           Y  PL+++RFVL  L  ++      G E    D +D IL EAA+    ++APLNR  D Q
Sbjct: 8   YTPPLKEIRFVLDHLAGMAEVAALPGFEDASPDMVDSILGEAAKIAENVLAPLNRIGDVQ 67

Query: 62  GCQW-VGGEVTTPDGMRDAYRQYVEHGWASMTGPQAYGGQGLPQMASASFHEMLMAASLS 120
           G +    G   T +G   A++  VE GW  +    A GG GLP + + +  EM  +A+++
Sbjct: 68  GAKLGTDGVARTAEGWGTAWQALVEGGWNGLPFDPARGGMGLPNLLNTAVQEMWHSANMA 127

Query: 121 FRIYSGLTEGAVLALHRHGSEPLKQAYLSRMVSGEWAGTMCLTEPQAGTDLALLRTRAQP 180
           F +   LT+GAV A+  +GSE LK  YL RM+SG W GTM +TEPQAG+DLA  R+RA P
Sbjct: 128 FALCPMLTQGAVNAVQLYGSEALKDLYLPRMISGGWTGTMNITEPQAGSDLAATRSRAVP 187

Query: 181 EADGSYRITGSKIFISGGEQDLTDNIVHLVLARLPDAPAGVRGISLFLVPKLLPG----- 235
             D  Y +TG KIFI+ G+ DLT+NIVHLVLARLPDAP GV+GISLF+VPK L       
Sbjct: 188 NGD-HYLVTGQKIFITYGDHDLTENIVHLVLARLPDAPPGVKGISLFVVPKFLVNPDGSL 246

Query: 236 GERNALGCGALEHKMGIKGASTCVMNFD---GAQGWLVGEANQGLACMFTMMNDARFQVG 292
           G RN + C +LEHK+GI G+ T V++F    GA G+LVGE N+GL  MF MMN AR  V 
Sbjct: 247 GARNQVKCVSLEHKLGIHGSPTAVLSFGDEGGATGFLVGEPNRGLEYMFAMMNHARLNVA 306

Query: 293 LQGLGIAEAAFQGGLAYARERLQSRSLAGPVAAEKPADPIIVHPDVRRMLLTQKTLTEGC 352
           +QGL IAE A+Q  LAYAR+R+Q + L      E  +  I+ HPDVRR+L+  K   E  
Sbjct: 307 MQGLAIAERAYQQALAYARDRVQGKPLGW---TEGQSKGIVNHPDVRRLLMGMKARIEAM 363

Query: 353 RMLGIYTARQLDLEHAAKSAPARQAAARRAALLIPIVKAFFTDVGQEVASLGVQVYGGHG 412
           R +    A  +D+ H       R  AA    LL PI K + T+ GQ++AS GVQV+GG G
Sbjct: 364 RGILYTAAAAVDVAHHHADEATRGRAALLVDLLTPIAKGWCTETGQQLASDGVQVHGGMG 423

Query: 413 YIREWGMEQLMRDSRITQLYEGTNGIQALDLIRRKVLGDGGAELNLLIDEMAPHVRAANA 472
           +I E G  Q +RD+RIT +YEGT  IQA DLI RK+L DGGA  N L+DE+A     A  
Sbjct: 424 FIEETGAAQHLRDARITTIYEGTTAIQANDLINRKLLRDGGAMANGLLDEIA---ALAGE 480

Query: 473 LGG-----LQAMATGVGQRLEEWRALSGHVVEACERDPQESGAVSVDFLAYSAYVLLAAM 527
           L G     L+     +   + E +     V+   ++DP+   A SV  L     V     
Sbjct: 481 LSGHTDEALRVTGAELVGAVHEAKQAIAWVLATAKQDPRLPAAASVTLLELMGVVAGGWQ 540

Query: 528 WLQAAVRAQATLATGSAETAFYRAKLDAATFYWRRILPRATAHREALLGGADCLMAL 584
             +AA  A   LA G A+TAF  AK   A FY   +LP+A A R  ++ G+  +MAL
Sbjct: 541 LARAAKVATERLAGGDADTAFLSAKPLTARFYATHVLPKAAALRATVVNGSASVMAL 597