Pairwise Alignments

Query, 307 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 303 a.a., PCP degradation transcriptional activation protein from Xanthobacter sp. DMC5

 Score =  164 bits (414), Expect = 3e-45
 Identities = 109/293 (37%), Positives = 156/293 (53%), Gaps = 7/293 (2%)

Query: 7   MNISNFDLNLLRVFDMLLREQNVSRAAERLALTQPTVSNALARLRDQLGDPLLVRVGRRM 66
           M+ S  DLNLL   + LL E+NV+RAA RL L+QP VS  LARLRD   DPLLV   R M
Sbjct: 1   MDTSRLDLNLLVTLEALLAERNVTRAAARLHLSQPAVSAQLARLRDLFDDPLLVPARRGM 60

Query: 67  RPTPRALALEGPIRAALQQIEQTLGTGDGFEPQRSHRQLRIALTDFVEQLCMPPLLARLE 126
            PT +A+ L GP+RAAL Q+  TL   D F+P  +   + IA +D+++   + PL+  L 
Sbjct: 61  TPTVKAVELAGPLRAALDQLRATLEARD-FDPATADLTVTIACSDYIQAAVVMPLVVALR 119

Query: 127 LLAPNVRIDVVHLAPNLPAEALDRGDLDLVLGRFDEVPARFTRHPWRRETLQIALRQQHP 186
             AP VR+ V HL P+L  + L  G+ DLVL       A         ET  +  R+ HP
Sbjct: 120 ARAPGVRVAVRHLMPDLIEQQLASGETDLVLTTPRPTQAHLRTQHLFAETYVLIGRRGHP 179

Query: 187 HLAPGQALDLDAFLGLRHIWV--HGGQTRGMVDQWLAEQGLTRQIAYTTPNYLQAAHLAA 244
            L  G  L ++ +  L H+ V   GGQ R  VD+ LA  G  R +  +  ++L    + A
Sbjct: 180 RLRRG--LSIEDYAELEHVIVSPSGGQFRTPVDEGLAALGHRRSVVMSAASFLFIPEIVA 237

Query: 245 ATDMCVVLPRQLAQQFAHLLPLAVHELPFALEPFELEVVHLSHRQHDPALAWL 297
           A+D+  ++PR+L +       L + ELP+  E F+++++            WL
Sbjct: 238 ASDVVALVPRRLLRD--PPARLVMIELPWLAEGFDVDLLWHERTHGHAGQRWL 288