Pairwise Alignments

Query, 307 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 304 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

 Score =  155 bits (392), Expect = 1e-42
 Identities = 108/302 (35%), Positives = 157/302 (51%), Gaps = 8/302 (2%)

Query: 6   SMNISNFDLNLLRVFDMLLREQNVSRAAERLALTQPTVSNALARLRDQLGDPLLVRVGRR 65
           S++I   DLNLLR+FD + R +NVSRAAE L LTQP  S+ L RLR  LGD L  R    
Sbjct: 3   SVHIDAVDLNLLRLFDAVYRSRNVSRAAEALGLTQPAASHGLTRLRLLLGDALFTRTPGG 62

Query: 66  MRPTPRALALEGPIRAALQQIEQTLGTGDGFEPQRSHRQLRIALTDFVEQLCMPPLLARL 125
           + PTPRA  L   +++AL  +++ L   + F+P  S +  RI ++D  E   +P L+ARL
Sbjct: 63  VAPTPRAERLAVSVQSALATLQEALSEPERFDPAASRKLFRIHMSDIGEGRFLPALMARL 122

Query: 126 ELLAPNVRIDVVHLAPNLPAEALDRGDLDLVLGRFDEVPARFTRHPWRRETLQIALRQQH 185
             L+P VR++ + LA    A ALD G +D   G    V     R    R+   + LR  H
Sbjct: 123 RELSPGVRVETMPLAAGEIATALDSGKVDFAFGFLPRVKDT-QRAQLLRDRYIVLLRHDH 181

Query: 186 PHL---APGQALDLDAFLGLRHIWVHGGQTRGMVDQWLAEQGLTRQIAYTTPNYLQAAHL 242
           P +     GQAL L+A   L ++ V   +T     + L    L  ++  TT +++    +
Sbjct: 182 PFVKRRRSGQAL-LEALQELDYVTV---RTHADTLRILQLLNLEDRVRLTTEHFMVLPAI 237

Query: 243 AAATDMCVVLPRQLAQQFAHLLPLAVHELPFALEPFELEVVHLSHRQHDPALAWLVEQIL 302
             ATD+ VV+PR +A+ FA     A+ E  F L  F + +      + DP   WL + I+
Sbjct: 238 VRATDLAVVMPRNIARGFAQEGGYAIVEPSFPLRDFTVSLHWSKRFEADPGNRWLRQVIV 297

Query: 303 TL 304
            L
Sbjct: 298 AL 299