Pairwise Alignments

Query, 307 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 299 a.a., CnmA from Pseudomonas putida KT2440

 Score =  139 bits (350), Expect = 8e-38
 Identities = 88/286 (30%), Positives = 142/286 (49%), Gaps = 3/286 (1%)

Query: 16  LLRVFDMLLREQNVSRAAERLALTQPTVSNALARLRDQLGDPLLVRVGRRMRPTPRALAL 75
           LL++FD+L + ++V+RAAE+L  +QPT+S  LARLR+QL DPL VR    M PTPRA  L
Sbjct: 12  LLQLFDVLYQCRSVTRAAEQLGQSQPTISIWLARLREQLNDPLFVRTPGGMAPTPRADQL 71

Query: 76  EGPIRAALQQIEQTLGTGDGFEPQRSHRQLRIALTDFVEQLCMPPLLARLELLAPNVRID 135
            GP R  L+ + +       F    + R+ R+ ++D      +P +L  L   AP +R++
Sbjct: 72  IGPCREVLESLRRLTAWEPQFIAATAQRRFRLCVSDASHITLLPSILNHLRSHAPGIRLE 131

Query: 136 VVHLAPNLPAEALDRGDLDLVLGRFDEVPARFTRHPWRRETLQIALRQQHPHLAPGQALD 195
              +  N  + AL+ G+ DL +G    +     +     +        QHP L  G  + 
Sbjct: 132 AARIDGNTES-ALESGEADLAIGFVPWLGGGMYQQVLFEQDWVCLSNPQHPRL--GDGMS 188

Query: 196 LDAFLGLRHIWVHGGQTRGMVDQWLAEQGLTRQIAYTTPNYLQAAHLAAATDMCVVLPRQ 255
           L+ +    H+ +  G  + +++  LA  G+ R+I    P +L    +   TD+   LPR 
Sbjct: 189 LERYRAEGHVQISFGTGQKLLEAGLARAGIERRIMLELPAFLGLGKIIGTTDLLGTLPRH 248

Query: 256 LAQQFAHLLPLAVHELPFALEPFELEVVHLSHRQHDPALAWLVEQI 301
           + Q  A +  L VH+ PF +E F ++    +    D    WL E +
Sbjct: 249 IGQTLADMHGLQVHDCPFEVEGFTVKQHWHARYHQDNGNRWLREVV 294