Pairwise Alignments

Query, 388 a.a., putative Acyl-CoA dehydrogenase from Pseudomonas putida KT2440

Subject, 384 a.a., Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.8.1) from Variovorax sp. SCN45

 Score =  208 bits (529), Expect = 2e-58
 Identities = 136/392 (34%), Positives = 204/392 (52%), Gaps = 19/392 (4%)

Query: 1   MYQPSEKAQQIIEAISGFVRNEILPLEQQAGLSWAEPHPRAVLQQVWQRSCEQGFYNIML 60
           M + +E    +++++   V  EI PL QQ  +   E  P  +++       + G     +
Sbjct: 1   MEERTELQAALLDSLQRVVDKEIAPLAQQ--MDEEEKFPEHLIRIFG----DMGLMQARV 54

Query: 61  PEAIGGAGLSVSDLCAVKEATV---LTGSMLAPHILGELSGPPRIGHLFKVASPTQIEAF 117
           PE  GG GL ++  C  KE      +TG+ L          P     L    +  Q   +
Sbjct: 55  PEEYGGPGLDLTTTCMAKELVARVSMTGAQLINQNTISFVLP-----LLHFGTDEQRRKW 109

Query: 118 LQPVCRAEKAVCFALTESEAGSDATAIKTSARREGEHYVLNGAKRYISGAPYADIAVLLA 177
           L  V +       A+TE  AGSD  A+KT+A REG+HYV+NG K +I+ AP AD   L A
Sbjct: 110 LPRVAKGGVVSSVAITEPHAGSDVGAMKTNAVREGDHYVVNGQKCFITMAPLADYITLFA 169

Query: 178 VTDP--GRGAQGISAFFVDLSAPGVRVESDYSVMSGGGA-HGDIMLDDVRVPAANRIGEQ 234
            T     RG   IS F VD+ + G+ +     +M   G  H DI  D+VRVP  NR+GE+
Sbjct: 170 KTGEVNRRGVDNISCFIVDMKSAGITLGGSEKMMGQRGTPHADIFFDNVRVPVENRMGEE 229

Query: 235 GQGFKLAMGRITLNRLLHCPTLLGLAGLALNLSIDYARTRKQFGQPIAMFQSINHMIADM 294
           G+GF   M  + LNR     + +G+A  A ++++ YA+ RK FG+ I  FQ +  M+ADM
Sbjct: 230 GRGFISCMHILDLNRPTVAASAVGVAQGAFDIAVAYAKERKAFGKAIGEFQGLQFMLADM 289

Query: 295 ATELHAARSMVYATAAVNDAGGNIR--TQAPMCKLFVSETAFRIADRAVQIHGGAGLLRG 352
             ++ AAR+++Y      DAG + R    A M K F ++ A ++   AVQ+ GG G +RG
Sbjct: 290 HIQIEAARALLYKCTRAIDAGQHDRLTEMASMVKCFCTDVAMKVTTDAVQVLGGHGYIRG 349

Query: 353 NPVEWIFRATRMMRILTGTSEIQRNTIAKGVL 384
           N VE + R  ++++I  GT++IQR  IA+  L
Sbjct: 350 NHVERMMRDAKVLQIYEGTNQIQRMVIARRAL 381