Pairwise Alignments

Query, 388 a.a., putative Acyl-CoA dehydrogenase from Pseudomonas putida KT2440

Subject, 380 a.a., Branched-chain acyl-CoA dehydrogenase (EC 1.3.99.12) from Sphingobium sp. HT1-2

 Score =  184 bits (467), Expect = 4e-51
 Identities = 133/391 (34%), Positives = 197/391 (50%), Gaps = 30/391 (7%)

Query: 5   SEKAQQIIEAISGFVRNEILPLEQQAGLSWAEPH--PRAVLQQVWQRSCEQGFYNIMLPE 62
           +++ + + E    F  + I P        W E H  PR  ++Q    + E GF  I + E
Sbjct: 7   TDEQRAVQELAQRFTADAITP----HAAKWDEDHHFPRDTIRQ----AAELGFGAIYVSE 58

Query: 63  AIGGAGLSVSDLCAVKEATVL----TGSMLAPHILGELSGPPRIGHLFKVASPTQIEAFL 118
             GG GL   +   + EA       T + ++ H +           + +       + +L
Sbjct: 59  ESGGIGLGRLESALIMEAMAYGCPSTSAFISIHNMAAWM-------IDRFGDEAVKQRYL 111

Query: 119 QPVCRAEKAVCFALTESEAGSDATAIKTSARREGEHYVLNGAKRYISGAPYADIAVLLAV 178
             +   E    + LTE  AGSDA +++T A  +G+HYV+ G+K +ISG    DI V++  
Sbjct: 112 PSLVTCETIASYCLTEPSAGSDAASLRTRAVLDGDHYVVTGSKAFISGGGENDIYVVMVR 171

Query: 179 TDPGRGAQGISAFFVDLSAPGVRVESDYSVMSGGGAHGD----IMLDDVRVPAANRIGEQ 234
           T    G +GIS   ++ +  GV   +    +   G H      +  D VRVP ANR+G +
Sbjct: 172 TGED-GPKGISCLVIEKNMEGVSFGAQERKL---GWHSQPTAQVNFDGVRVPVANRVGAE 227

Query: 235 GQGFKLAMGRITLNRLLHCPTLLGLAGLALNLSIDYARTRKQFGQPIAMFQSINHMIADM 294
           GQGF +AM  +   RL      LG A  AL+ ++ Y R R+QF + IA FQ+    +ADM
Sbjct: 228 GQGFAIAMAGLDGGRLNIGACSLGGAQRALDEAVGYTRDRRQFDRAIADFQNTQFTLADM 287

Query: 295 ATELHAARSMVYATAAVNDAGGNIRTQ-APMCKLFVSETAFRIADRAVQIHGGAGLLRGN 353
            TEL AARS++Y  AA    G   +T+ A M K F ++T   +ADRA+Q+HGG G L   
Sbjct: 288 ETELQAARSLLYLAAAKVSEGAPDKTKFAAMAKRFATDTGSAVADRALQLHGGYGYLMDY 347

Query: 354 PVEWIFRATRMMRILTGTSEIQRNTIAKGVL 384
           PVE I+R  R+ RIL GT+EI R   A+ +L
Sbjct: 348 PVERIWRDLRVHRILEGTNEIMRMITARELL 378