Pairwise Alignments

Query, 515 a.a., long-chain-fatty-acid--CoA ligase from Pseudomonas putida KT2440

Subject, 559 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Variovorax sp. SCN45

 Score =  234 bits (597), Expect = 6e-66
 Identities = 171/543 (31%), Positives = 267/543 (49%), Gaps = 48/543 (8%)

Query: 2   NLGTLSSRSARYWPERLAVIDRHTRLTFAQLEQRANQLASALLAQGIATGEHVAILAPNR 61
           +L  L   S   + +R A       +++ + ++++   A+ L   G+  G+ VA + PN 
Sbjct: 25  SLVALMEESFSKYADRTAYSFMGKDISYGETDKQSKAFAAYLQGLGLVKGDRVAAMMPNC 84

Query: 62  AELVEAEVAFYKAGLVKVPVNARLAPDEVIQVLNDACSVALIADAQLAQALLARRQEVPA 121
            +   A  A  +AGL+ V VN    P E+   L D+ + A+I        L       P 
Sbjct: 85  PQYPIAVAAILRAGLILVNVNPLYTPRELEHQLKDSGAKAIIIMENFGTTLQQCIASTPI 144

Query: 122 LRLIV-TLGERGGDITYAALL----------------------------AQGSSQPISCD 152
             +++ ++G+R G +  A +                             A GS +P++  
Sbjct: 145 KHIVLASMGDRLGFLKGALVNYVVRNVKKLVPHFSLPGAVRFNDALDKGASGSVKPVAIG 204

Query: 153 LPDDALAVLHYTSGSSGVLKAAMLSVGNRKALIRKSLA--SPTRRAAPGDVM---AHVGP 207
            PDD +AVL YT G++GV K A+L   N  A + +S A   P     P +         P
Sbjct: 205 -PDD-VAVLQYTGGTTGVSKGAVLLHRNVIANVLQSEAWNEPAMAKVPANEQPTGVCALP 262

Query: 208 ITHASGMQLMPLLAV---GACNLLLERYDDQLLLETIQREGVTRLFLVPAMINRLVNFPD 264
           + H     +  +L++   G   L+    D   +L+ + +  +     V  + N L N PD
Sbjct: 263 LYHIFAFTVGMMLSMRTGGKLILIPNPRDIPAVLKELSKHTIHSFPAVNTLFNGLANHPD 322

Query: 265 VERYDLSSLRLVMYGAAPMAPALVKRAIEVFGPILAQGYGAGETCSLVTVLTEQDHLCEG 324
               +  +L++ + G   +  A+ K  +E  G  + +GYG  ET    T          G
Sbjct: 323 FNTVNWKNLKISVGGGMAVQAAVAKLWLEKTGCPICEGYGLSETSPSTTCNPTNSTAYTG 382

Query: 325 GDYRRLASCGRCYFETDLRVVNDHFQDVQPGEVGEIVVKGPDIMQGYWRAPHLTAEVMR- 383
                  + G     T L++++D   +V  GE GEI +KGP +M GYW+ P  TA+VM  
Sbjct: 383 -------TIGLPLPGTWLKLLDDEGNEVPLGERGEIAIKGPQVMAGYWQRPDETAKVMTP 435

Query: 384 DGYYLTGDLATVDEQGYVFIVDRKKEMIISGGFNIYPSEVEQVLYSMPQVFEAAVVGVPD 443
           DGY+ +GD+  VDE+GY  +VDRKK+MI+  GFN+YP+EVE V+  +P V E A VGVPD
Sbjct: 436 DGYFKSGDIGVVDERGYFKVVDRKKDMILVSGFNVYPNEVEDVVALIPGVLECAAVGVPD 495

Query: 444 EQWGEAVRAVIVLKPGMALQEQDVIEHCAQALAGFKKPRAVDFVSELPKNPNGKVVRRLI 503
           E+ GEAV+ VIV K   +L E  V E+C   L G+K+PR V+F +E+PK P GK++RR +
Sbjct: 496 EKTGEAVKLVIV-KKDPSLTEAQVREYCRANLTGYKQPRIVEFRTEMPKTPVGKILRREL 554

Query: 504 RDA 506
           RD+
Sbjct: 555 RDS 557