Pairwise Alignments

Query, 515 a.a., long-chain-fatty-acid--CoA ligase from Pseudomonas putida KT2440

Subject, 528 a.a., O-succinylbenzoic acid--CoA ligase (EC 6.2.1.26) from Variovorax sp. SCN45

 Score =  227 bits (578), Expect = 9e-64
 Identities = 172/512 (33%), Positives = 262/512 (51%), Gaps = 16/512 (3%)

Query: 9   RSARYWPERLAVIDRHTRLTFAQLEQRANQLASALLAQGIATGEHVAILAPNRAELVEAE 68
           R +R +P + A        T+A++ QRA++LA  L++ G   G+ VAIL     E+ E  
Sbjct: 10  RVSRNYPGKKAYRCGAVSRTWAEMNQRADRLAGGLMSLGARRGDCVAILGQESLEIYEHY 69

Query: 69  VAFYKAGLVKVPVNARLAPDEVIQVLNDACSVALIADAQLAQALLARRQEVPALRLIVTL 128
            A  KAGLV+V +N R AP E+  +L D     ++ + +    L A    V     +V  
Sbjct: 70  FACMKAGLVRVGINWRYAPAEIAHILKDCAVKVVLVEQRCISQLSAALTLVDLPIEVVVY 129

Query: 129 GERGGDIT---YAALLAQGSSQPIS-CDLPDDALAVLHYTSGSSGVLKAAMLSVGNRKAL 184
           G+  GD+    Y  LLA+  S PI+  DL D    V+ YTSGS+GV K  + S  +   +
Sbjct: 130 GQ--GDMHVMGYERLLAR--STPIAPIDLHDSEPLVISYTSGSTGVPKGVVHSHRSVALI 185

Query: 185 IRKSLASPTRRAAPGDVMAHVGPITHASGMQLMPLLAVGACNLLLE-RYDDQLLLETIQR 243
           I +   S  R     DV       +  + +  M  LA G   ++ +  ++    +E  QR
Sbjct: 186 IMQGAIS--RGLTTDDVWYAATASSWMACVLNMIGLANGMTTIITDGAFEIDAFIEETQR 243

Query: 244 EGVTRLFLVPAMINRLVNFPDVERYDLSSLRLVMYGAAPMAPALVKRAIEVFGPILAQGY 303
             +T   LVP ++ RLV+        LSSLRL+MYG++P +  L++R +  F   L Q Y
Sbjct: 244 HQITTALLVPTIVGRLVDRCSATPEVLSSLRLLMYGSSPASVGLIERVLGTFRCRLMQTY 303

Query: 304 GAGETCSLVTVLTEQDH-LCEGGDYRRLASCGRCYFETDLRVVNDHFQDVQPGEVGEIVV 362
           G  E    V+ LT  DH L   G    L S GR      + + ++   ++  G+ GE+ +
Sbjct: 304 GMTEG-GWVSHLTPADHELGLKGRSELLRSAGRVGGMYQMSIRDEEGTELPLGQAGEVWL 362

Query: 363 KGPDIMQGYWRAPHLTAEVMRDGYYLTGDLATVDEQGYVFIVDRKKEMIISGGFNIYPSE 422
           +G   M  Y   P  T E +  G+  T D+   DE+GY++++DRKK +II+G  N++P+ 
Sbjct: 363 RGETTMLRYHNRPSETEEALAGGWLHTNDIGRFDEEGYLYLLDRKKFLIITGAVNVFPAS 422

Query: 423 VEQVLYSMPQVFEAAVVGVPDEQWGEAVRAVIVLKPG-MALQEQDVIEHCAQALAGFKKP 481
           VE VL   P V E +VVG P  +WGEAV AV+  +PG  AL   ++    A  L+  + P
Sbjct: 423 VEAVLGRHPAVREISVVGAPHPEWGEAVVAVVSQRPGHPALTTAELGAFAAAQLSRMELP 482

Query: 482 RAVDFVSELPKNPNGKVVRRLIRDAYWQNSER 513
           + V  + ELPK   GK+ +R I+D  W +S+R
Sbjct: 483 KHVMTMEELPKTVTGKIDKRAIKD--WVDSQR 512