Pairwise Alignments

Query, 515 a.a., long-chain-fatty-acid--CoA ligase from Pseudomonas putida KT2440

Subject, 519 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Variovorax sp. SCN45

 Score =  296 bits (759), Expect = 9e-85
 Identities = 193/511 (37%), Positives = 278/511 (54%), Gaps = 25/511 (4%)

Query: 19  AVIDRHTRLTFAQLEQRANQLASALLAQGIATGEHVAILAPNRAELVEAEVAFYKAGLVK 78
           AV+   TRL FA    R  +L + L   G+  G+ V +++ N    VE     +  G V 
Sbjct: 19  AVVCGDTRLDFAGFTDRVARLGAVLRQLGMRPGDRVGMMSLNSHRFVEYFFGTWWGGGVI 78

Query: 79  VPVNARLAPDEVIQVLNDACSVALIADAQLAQALLARRQEVPALRLIVTLGERG---GDI 135
            PVN R  P EV   L+D  +  L+ D   A      R    +LR +V  G+     G +
Sbjct: 79  NPVNIRWNPKEVAYSLDDCDTRILLVDDVFAPMAAELRGLSSSLRTVVYCGDGAVPEGMV 138

Query: 136 TYAALLAQGSSQPISCDLPDDA--LAVLHYTSGSSGVLKAAMLS--------VGNRKALI 185
            Y ALLA  ++ P   D P D+  LA + YT G++G  K  ML+        +G   AL 
Sbjct: 139 GYEALLA--ATDPAE-DAPHDSDELAAVMYTGGTTGQPKGVMLTHGSLCINALGTVAALP 195

Query: 186 RKSLASPTRRAAPGDVMAHVGPITHASGMQLMPLLAVGACNLLLERYDDQLLLETIQREG 245
           R +  +    AAP   +A  G +   S M+L+P+  V         +D+  +L T+Q   
Sbjct: 196 RDTQDAAAIVAAPMFHVAGCG-VALQSLMRLVPVHVVPV-------FDELAVLRTLQSAR 247

Query: 246 VTRLFLVPAMINRLVNFPDVERYDLSSLRLVMYGAAPMAPALVKRAIEVF-GPILAQGYG 304
           +T +FLVP MI R++  P    +DLSSLRL+ YGAAP+  AL+ +A+  F G   AQ YG
Sbjct: 248 ITEMFLVPTMIKRVIEHPRFAEFDLSSLRLLSYGAAPIDAALLDQAMRAFPGTAFAQVYG 307

Query: 305 AGETCSLVTVLTEQDHLCEGGDYRRLASCGRCYFETDLRVVNDHFQDVQPGEVGEIVVKG 364
             E   +VT L    H       R L S G      +LR+V+    +V  G+VGEIV +G
Sbjct: 308 MTELSPVVTALPSHCHAPGPDRERLLRSAGTPIPIAELRIVDGDDNEVPFGQVGEIVARG 367

Query: 365 PDIMQGYWRAPHLTAEVMRDGYYLTGDLATVDEQGYVFIVDRKKEMIISGGFNIYPSEVE 424
           P +M+GYW  P  T   +R G+  TGD   +DE+G+VF+VDR K+MI+SGG N+Y +EVE
Sbjct: 368 PMVMKGYWNKPKETEAALRGGWMHTGDGGYMDEEGFVFVVDRMKDMIVSGGENVYSAEVE 427

Query: 425 QVLYSMPQVFEAAVVGVPDEQWGEAVRAVIVLKPGMALQEQDVIEHCAQALAGFKKPRAV 484
             +  +PQV  +AV+GVPD++WGE V AVIV + GMAL+ + VI HC + +AG+K PR+V
Sbjct: 428 NAIAQLPQVLMSAVIGVPDDKWGERVHAVIVRREGMALEAEAVIAHCREQIAGYKCPRSV 487

Query: 485 DFVSELPKNPNGKVVRRLIRDAYWQNSERRI 515
           +F   LP +  GK+ +  +R+ +W    RR+
Sbjct: 488 EFRDALPLSAAGKLQKFQLREPFWAGRSRRV 518