Pairwise Alignments

Query, 515 a.a., long-chain-fatty-acid--CoA ligase from Pseudomonas putida KT2440

Subject, 524 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Variovorax sp. SCN45

 Score =  457 bits (1175), Expect = e-133
 Identities = 250/515 (48%), Positives = 332/515 (64%), Gaps = 3/515 (0%)

Query: 2   NLGTLSSRSARYWPERLAVIDRHTRLTFAQLEQRANQLASALLAQGIATGEHVAILAPNR 61
           N+G L SR+AR    RLAV      +T+ QLEQR+N+LA+AL   G+  GE V +  PN 
Sbjct: 11  NVGALVSRAARIHARRLAVTSAARAVTYQQLEQRSNRLANALCGLGLQRGERVGVYLPNC 70

Query: 62  AELVEAEVAFYKAGLVKVPVNARLAPDEVIQVLNDACSVALIADAQLAQALLARRQEVPA 121
            E+VE E+A YKA LVK P+N+RLAP EV +V+ ++ +  ++  A+ A++ L   +   A
Sbjct: 71  IEIVELELACYKAALVKAPMNSRLAPVEVAEVIANSEAALVVTTAERAESFLPHLKGA-A 129

Query: 122 LRLIVTLGERGGDITYAALLAQGSSQPISCDLPDDALAVLHYTSGSSGVLKAAMLSVGNR 181
            RL++    +    +Y   +A+ S    +  +  D LAVLHYTSGSSGVLKAAM + GNR
Sbjct: 130 PRLLLLDAAQDTPASYEGQMARASDSFTAARVHADELAVLHYTSGSSGVLKAAMQTFGNR 189

Query: 182 KALIRKSLASPTRRAAPGDVMAHVGPITHASGMQLMPLLAVGACNLLLERYDDQLLLETI 241
            A +RK L        PGD++  VGPITHASGMQL+P L  GA   L   ++    +  +
Sbjct: 190 LAQLRKFLMRADN-PRPGDLLGLVGPITHASGMQLVPALCSGATIRLFAGFEPARFIAEM 248

Query: 242 QREGVTRLFLVPAMINRLVNFPDVERYDLSSLRLVMYGAAPMAPALVKRAIEVFGPILAQ 301
           +RE VT  F+VP MIN L+     +   L  L  + YGAAPMAPA + +A++VFGP+L+Q
Sbjct: 249 KRERVTHTFMVPTMINMLLAEVQGQYRPLPDLHRLGYGAAPMAPARIMQAMDVFGPVLSQ 308

Query: 302 GYGAGETCSLVTVLTEQDHL-CEGGDYRRLASCGRCYFETDLRVVNDHFQDVQPGEVGEI 360
           GYGAGET S V  L+  DHL        RLASCGR + E+ + + +D  Q V  GE+GEI
Sbjct: 309 GYGAGETTSGVCGLSVDDHLFARAAMPGRLASCGRPFLESQVDICDDDGQPVAAGEIGEI 368

Query: 361 VVKGPDIMQGYWRAPHLTAEVMRDGYYLTGDLATVDEQGYVFIVDRKKEMIISGGFNIYP 420
           VV G D+  GYWRAP LTAEV+++G Y TGDLA  D++GY++IVDRKK+M+ISGGFN+YP
Sbjct: 369 VVGGADVFAGYWRAPQLTAEVLKNGRYHTGDLARADDEGYIYIVDRKKDMVISGGFNVYP 428

Query: 421 SEVEQVLYSMPQVFEAAVVGVPDEQWGEAVRAVIVLKPGMALQEQDVIEHCAQALAGFKK 480
           SEVE VLY    V EA V  VPD++WGEAV A IV KPG  L    +   CA+ LAGFK+
Sbjct: 429 SEVEAVLYQHAAVDEACVFSVPDDKWGEAVAAHIVRKPGAVLDAAALDAFCAERLAGFKR 488

Query: 481 PRAVDFVSELPKNPNGKVVRRLIRDAYWQNSERRI 515
           PR ++FV  L KN NGK+ R+ I+  YW   +RR+
Sbjct: 489 PRRIEFVEALEKNANGKIARKAIQTPYWAGHDRRV 523