Pairwise Alignments

Query, 404 a.a., benzoate transport protein from Pseudomonas putida KT2440

Subject, 396 a.a., membrane protein from Pseudomonas simiae WCS417

 Score =  344 bits (883), Expect = 2e-99
 Identities = 174/395 (44%), Positives = 253/395 (64%), Gaps = 1/395 (0%)

Query: 1   MDAPAQSSATPLRLTDILHPVIAGLVSVIVNYGGTFILVFQAAKVAGLSPELTSSWVWAV 60
           M+   Q+   PL  T     V+AG ++++  Y  + +L+FQA + AGL+    SSW+WA+
Sbjct: 1   MNDATQAPLRPLADTSA-SAVVAGFIAMMTGYTSSLVLMFQAGQAAGLTTAQISSWIWAI 59

Query: 61  SIGVGLSGLALSWYSREPVITAWSTPAAAFLVTALASVPYSEAIGAYLLSAAGFVVLGLS 120
           SIG+ +  + LS   R P+  AWSTP AA L+T+L  V Y EAIGAY+  A    + G++
Sbjct: 60  SIGMAVCSIGLSLRYRTPITIAWSTPGAALLITSLGGVSYGEAIGAYITCAVLVTICGMT 119

Query: 121 GCFERLVRVVPGGIAAGLLAGILLQFGIGAFASLSVDPSLAGLLIAAYVAFKRFTARYAV 180
           G FE+LV+ +P  +AA LLAGIL + G   F +      L   +   Y+  KR + RYAV
Sbjct: 120 GSFEKLVKRIPASLAAALLAGILFKIGSEIFVAAQHRTGLVLGMFFTYLVIKRLSPRYAV 179

Query: 181 VAILLLGLGYLLLQGQVGLTTLRLEFASPVFTAPTFSLNAALSVALPLFLITLTGQYMPG 240
           +A LL+G     L G +  +   LE A+PV+T P FSL A +S+ +PLF++ +T Q MPG
Sbjct: 180 LAALLIGTALSGLMGLLDFSGFHLEVATPVWTTPHFSLAATISIGIPLFVVAMTSQNMPG 239

Query: 241 MLVLRNDGFKTSANPIVAVTGMGSLLMAPFGSHAFNIAAITAAICTGKEAHENPDKRWVA 300
           + VLR DG+   A+P++  TG+ SL++APFGSH  N+AAI+AAICTG  AHE+ +KR+ A
Sbjct: 240 VAVLRADGYNVPASPLITATGLASLVLAPFGSHGINLAAISAAICTGPHAHEDRNKRYTA 299

Query: 301 GIAAGVCYILVGVFGVTLASVFMALPGTFITTLAGLALLGTIGASLASALADARSRESAL 360
            +  GV Y + GVFG TLA++F ALP   + ++A LAL G+I   L+ A+ + + RE+AL
Sbjct: 300 AVWCGVFYGIAGVFGATLAALFAALPKELVLSIAALALFGSIINGLSIAMNEPKEREAAL 359

Query: 361 ITFLAAAANISLLGIGGAFWGLVIGLLAHVVLNGR 395
           ITF+  A+ ++L  IG AFWG+V G+L  ++LN R
Sbjct: 360 ITFMVTASGLTLFSIGSAFWGIVAGVLTLLILNWR 394