Pairwise Alignments

Query, 412 a.a., Exonuclease SbcD from Pseudomonas putida KT2440

Subject, 400 a.a., Exonuclease SbcD from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  170 bits (431), Expect = 6e-47
 Identities = 134/423 (31%), Positives = 206/423 (48%), Gaps = 37/423 (8%)

Query: 1   MRLFHTSDWHLGQSLHGQERDFEHACFLDWLLGQLRLRQPDALLIAGDIFDTVNPPVKAQ 60
           MR+ HTSDWHLGQ+ + + R  EH  FLDWLL   +  Q DA+++AGDIFDT +PP  A+
Sbjct: 1   MRILHTSDWHLGQNFYSKSRAAEHQAFLDWLLETAQAHQVDAIIVAGDIFDTGSPPSYAR 60

Query: 61  ERLYDFIVQAHEQQPKLDIVMIAGNHDSGSRIELPAALMRRLRTHALGRVHWLDEGQLDA 120
           E    F+V    QQ    +V++AGNHDS + +     ++  L T  +    +       A
Sbjct: 61  ELYNRFVVNL--QQTGCHLVVLAGNHDSVATLNESRDILAFLNTTVIASAGY-------A 111

Query: 121 ERLLIPLTNGRGKVAAWCLALPFLRPAEVTGPQLG-------DDYLQGITQVHQQLIAAA 173
            RLL       G V      +PFLRP ++   Q G          L  I   +QQ    A
Sbjct: 112 PRLLHRRDGSPGAVLC---PIPFLRPRDIITSQAGLSGSEKQQQLLHAIADYYQQQYQEA 168

Query: 174 LKKRKKDQALIAISHAHMAG-GAVSEDSERSLIIGNAEALPAKLFDKAISYVALGHLHKP 232
            + R  ++ L  I+  H+   GA   D+ R + IG  +A PA+ F  A  Y+ALGH+H+ 
Sbjct: 169 CQLR-GERKLPVIATGHLTTVGASKSDAVRDIYIGTLDAFPAQHFPPA-DYIALGHIHRA 226

Query: 233 QKVNREERIRYSGSPIPLSFAEINYPHQVLEVELDGNGLVSVEPR--PVPRAVALQRVGP 290
           Q V   E IRY GSPI LSF E      V  V  +     S E    PV + +A+ +   
Sbjct: 227 QCVGGTEHIRYCGSPIALSFDECGKSKCVHLVTFEQGKWQSTESLAVPVTQPLAVLKGDL 286

Query: 291 APLGELLQQLADLPVVDLLEDPNRQPWLEVRVLLDEPQPDLRQQIETALEGKAVR--LIR 348
           A + E L+Q   +       + +   WL++ +  D+   D++++I+T  E   V   L+R
Sbjct: 287 ASITEQLEQWRGV-------EQSPPVWLDIEITTDDYLHDIQRRIQTLTESLPVEVLLVR 339

Query: 349 ISAEYAGRNNAEDDDLAFVELAQMTPQDLFSRAWE-QAYGNPADDQALADFALLLQDVQQ 407
            S E   R+ A +       L++++ +++F+R    +A   P  ++    F+  L  + +
Sbjct: 340 RSREQRERSLANE---RRETLSELSVEEVFARRLALEALDPPQRERLNQLFSSTLYALNE 396

Query: 408 EEE 410
           E E
Sbjct: 397 EHE 399