Pairwise Alignments

Query, 412 a.a., Exonuclease SbcD from Pseudomonas putida KT2440

Subject, 409 a.a., exonuclease SbcD from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 95.1 bits (235), Expect = 3e-24
 Identities = 115/435 (26%), Positives = 193/435 (44%), Gaps = 52/435 (11%)

Query: 1   MRLFHTSDWHLGQSLHGQERDFEHACFLDWLLGQLRLRQPDALLIAGDIFDTVNPPVKAQ 60
           ++L H++DWHLG+ L    R  E    L+ ++        D +L+AGDIFD+ NP  +A 
Sbjct: 2   LKLLHSADWHLGKRLQEYARLPEQQLVLEEMIEVADREDVDLVLLAGDIFDSFNPSHEAV 61

Query: 61  ERLYDFIVQAHEQQPKLDIVMIAGNHDSGSRIELPAALMRRLRTHALGRVHW-LDEGQLD 119
           E LY   ++   +  K  +V I+GNHDS   I  P  L R L           L  G++D
Sbjct: 62  ELLYK-TLRKLSKDGKRPVVAISGNHDSTQFISAPDPLARELGILFYSSYEQVLAPGKVD 120

Query: 120 AERLLIPLTNGRGKVAAWCLALPFLRPAE-VTGPQLGDDYLQGITQVHQQLIAAALKK-- 176
           +   L    +  G V       PF  P   +  P   +  L+  T + ++   AAL++  
Sbjct: 121 SG--LEITQSSPGFVELKLPQHPF--PVRIILAPYANEVLLK--TYLGEEDKEAALREVL 174

Query: 177 RKK---------DQALIAISHAH---MAGGAVSE---DSERSLI-IGNAEALPAKLFDKA 220
            KK         D A + +   H   M  G   E   +SER ++ +G  +AL   L   +
Sbjct: 175 GKKWQNIADNYCDDAGVNLFMGHFFFMKEGEKPEAEPESERPILHVGGTQALYTHLIPDS 234

Query: 221 ISYVALGHLHKPQKVNREE-RIRYSGSPIPLSFAEINYPHQVLEVELDGNGLVSVEPRPV 279
           I Y ALGHLH+   V+++   + YS SP+  SF+E N   +V+ V+ + N  V  EP   
Sbjct: 235 IQYAALGHLHRYHSVDKQPCPVVYSSSPLAYSFSEANQEKKVVLVKAEPNTPVQYEP--- 291

Query: 280 PRAVALQRVGPAPLGELLQQLADLPVVDLLEDPNRQPWLEVRVLLDEP---QPDLRQQIE 336
              ++L++      G  L Q     + D L      P+  V ++ +       + R+ I 
Sbjct: 292 ---ISLKQ------GRPLYQKTFSNLADTLAWLQENPYCFVEIIYETTSSIDAETRKTIM 342

Query: 337 TALEGKAVRLIRISAEYAGRNNAEDDDLAFVELAQMTPQDLFSRAWEQAYGNPADDQALA 396
            A +G    ++ +     G  NA+   L   +L +     LFS+ ++ + G   ++    
Sbjct: 343 KAHDG----IVNLIPRLTGDQNADGSGLRAEDLGK-DMGTLFSQFYQSSKGVAPNE---- 393

Query: 397 DFALLLQDVQQEEEQ 411
           + ++L  ++  + EQ
Sbjct: 394 EISVLFNEIISQNEQ 408