Pairwise Alignments

Query, 412 a.a., Exonuclease SbcD from Pseudomonas putida KT2440

Subject, 429 a.a., Nuclease SbcCD subunit D from Acinetobacter radioresistens SK82

 Score =  362 bits (929), Expect = e-104
 Identities = 195/416 (46%), Positives = 266/416 (63%), Gaps = 10/416 (2%)

Query: 1   MRLFHTSDWHLGQSLHGQERDFEHACFLDWLLGQLRLRQPDALLIAGDIFDTVNPPVKAQ 60
           +R FHTSDWHLGQ  +   R +EH  FL WL+ Q++ +QP ALLIAGD+FD +NP   AQ
Sbjct: 12  VRFFHTSDWHLGQFFYNHSRQYEHQQFLTWLIEQIKDKQPHALLIAGDVFDVINPASSAQ 71

Query: 61  ERLYDFIVQAHEQQPKLDIVMIAGNHDSGSRIELPAALMRRLRTHALGRVHWLDEGQLDA 120
           ++LY F+  AH   P +  +MIAGNHDSG R+E    L+ +     +G V W  E +LD 
Sbjct: 72  KQLYQFLADAHSAAPHMQTLMIAGNHDSGYRLEQVEPLLEKYNAKTVGIVRWNTEHRLDF 131

Query: 121 ERLLIPLTNGRGKVAAWCLALPFLRPAEVTG-PQLGDDYLQGITQVHQQLIAAALKKRKK 179
           +RL++P+ N   ++ AWC+ALPFLRPAE+TG  +   D  Q I  +HQ LI  AL+++  
Sbjct: 132 DRLILPIHNEYQEIVAWCIALPFLRPAEITGHGEATQDSQQAIEYIHQALIKEALQRKTA 191

Query: 180 DQALIAISHAHMAGGAVSEDSERSLIIGNAEALPAKLFDKAISYVALGHLHKPQKVNREE 239
           DQALI +SHAHM G   S++SER +IIGN EAL  +LF   I YVALGHLHKPQKV +  
Sbjct: 192 DQALILMSHAHMQGADESKESERPIIIGNHEALSTELFSPEIDYVALGHLHKPQKV-QSP 250

Query: 240 RIRYSGSPIPLSFAEINYPHQVLEVELD---GNGLVSVEPRPVPRAVALQRVGPAPLGEL 296
            +RYSGSPIPLSF+E+NY HQVLEV +D       + + P  +PR V L R+    L E+
Sbjct: 251 HVRYSGSPIPLSFSELNYKHQVLEVNIDPDLSENRLEMNPLYIPRTVQLHRLS-GELDEV 309

Query: 297 LQQLADLPVVDLLEDPNRQPWLEVRVL-LDEPQPDLRQQIETALEGKAVRLIRISAEYAG 355
           L QL  LP  + + D +++ +L++    L  P PDLR++IE  L  +  RL+RIS +Y  
Sbjct: 310 LTQLTLLPAGE-ISDIDQRDYLDIEYYSLTPPPPDLRKKIEDLLPPERYRLVRISRKYLQ 368

Query: 356 RNNAEDDDLAFVELAQMTPQDLFSRAWEQAYGNPADDQALADFALLLQDVQQEEEQ 411
           ++++E    + ++LA  TP+ LF + W Q  G   D+Q   DF  LLQD QQ E +
Sbjct: 369 QSSSE-VHASKIDLAPPTPEQLFEQLW-QKMGYSQDEQVKQDFMTLLQDAQQSEHK 422