Pairwise Alignments

Query, 1214 a.a., Exonuclease SbcC from Pseudomonas putida KT2440

Subject, 1162 a.a., chromosome segregation protein SMC from Pseudomonas simiae WCS417

 Score =  105 bits (261), Expect = 3e-26
 Identities = 259/1203 (21%), Positives = 460/1203 (38%), Gaps = 189/1203 (15%)

Query: 1    MKILAIRLKNLASLAGPIDIDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGTVPR 60
            M++  I+L    S   P  ++F +       + A+ GP G GKS ++DA+   +      
Sbjct: 1    MRLKCIKLAGFKSFVDPTTVNFPSN------MAAVVGPNGCGKSNIIDAVRWVM------ 48

Query: 61   LNAIGREAKVPDADGDIPTSDPRNLLRRGTGSGFAEVDFVGIDGRRYRARWEANRARDKA 120
                               S  +NL     G    +V F G   R+  ++       D +
Sbjct: 49   -----------------GESSAKNL----RGESMTDVIFNGSTSRKPVSQASIELVFDNS 87

Query: 121  NGKLQHSRQSFYDLD-SEQVLGSGKNEY---------KQLVEARLGLNFEQFTRAVMLAQ 170
            +G L     ++ ++    +V    +N Y         + + +  LG      + ++ + Q
Sbjct: 88   DGTLIGEYAAYAEISIRRKVTRDSQNSYFLNGTKCRRRDITDIFLGTGLGPRSYSI-IEQ 146

Query: 171  SEFGAFLKADDKDRSELLEKLTNTAIYTRLGQRAFSKAREAGEAHNALKERASHLLPMAA 230
                  ++A  +D    +E+    + Y         + RE         E  + L  +  
Sbjct: 147  GMISKLIEAKPEDLRNFIEEAAGISKYKE-------RRRETENRIRRTHENLARLTDLRE 199

Query: 231  EARAELDQ--RLEQAQQQFKADQAGERQLEQQRNWLNEQRQLQAQHTEASTTLQAAELDW 288
            E   +L++  R  QA ++++  +  ERQL+ Q + L  Q  L  Q  +    +   E+ +
Sbjct: 200  ELERQLERLHRQAQAAEKYQEYKGEERQLKAQLSALRWQA-LNDQVGQREAIIGTQEISF 258

Query: 289  QQL-AEPRLDLARLERLAPQRHQFHRR-QALSAQLAPVAAKIAEQQQQQAELQVRTRELE 346
            + L AE R   A +ERL    H    R   +  +   V   IA  +Q     Q R R+L+
Sbjct: 259  EALVAEQRNADASIERLRDGHHDLSERFNLVQGRFYSVGGDIARVEQSIQHGQQRLRQLQ 318

Query: 347  QALDTARQALADRQAEHGENAPRLRQAFAAQDTLARLDQELAAQRSISQQAQQQVADGQQ 406
              L  A +A  + ++  G +   L        TL      L  ++ I+  A ++ A   +
Sbjct: 319  DDLKEAERARLETESHLGHDRTLLL-------TLGEELDMLTPEQEITSAAAEEAAAALE 371

Query: 407  QLQQLEDNQQRSVQQLALIDTALADSQHLAGLANAWHAYLPQLKQVMLIGGRLTKGREEL 466
            + +      Q         DT    S      A    + + QL+  M          E L
Sbjct: 372  ESETTMHGWQEQW------DTFNLKSAEPRRQAEVQQSRIQQLETSM----------ERL 415

Query: 467  PGLQAQASQANARLQAE-RDAYDLLFREAKAEPQALAEQIDLLGGMLQDNRKQQRAVEEM 525
               Q +  +    L A+  DA  +   E  AE +   E+++           +++ VE +
Sbjct: 416  AERQRRLQEERVLLAADPEDAAIMELSEQLAESEMTLEELEA---------SEEQQVERL 466

Query: 526  SRLHGREQELRQQLDALRERQQQAMLQRQQLITEGTAAKAELEAAEQAL----------T 575
                   ++LRQQL    + QQQA    Q+L        A LEA +QA            
Sbjct: 467  -------EQLRQQLQQATQAQQQAQGDLQRL----NGRLASLEALQQAALDPGTGTAEWL 515

Query: 576  LTRQLLERQRLARNTSVE---ELRNQLRDGEPCPVCGSAEHPFHQPEALLQSLGRHDQAE 632
              + L ER RLA    VE   EL  +   G                  L+   G  D A 
Sbjct: 516  RDQHLAERPRLAEGLKVEAGWELAVETVLGADLQA------------VLVDDFGGFDLA- 562

Query: 633  EHAAQKQVETLNSKLVELRTQLGVVNAQLKDFQQQQQRLGEQLQPLVAQVQ-AHSLWPAL 691
               AQ  +  L+      R     V   L D    +      L P + QV+   SL  AL
Sbjct: 563  -GFAQGDLRLLSPAADGTR-----VPGSLLD----KVEAAIDLSPWLGQVKPVESLEQAL 612

Query: 692  APQDDKARSAWLDSQ----LRRLDEEISQDEKRQSALLALQRDAARLNQQLQAAHDAQQQ 747
            A +   A    L S+    + R    + +  + +S +LA  ++       L A  + ++ 
Sbjct: 613  AQRGQLAAGESLISRDGYWVGRHFLRVRRASEAESGVLARGQEIV----NLIAEREEREA 668

Query: 748  AQRHLEQQHQALANDEQLLQQGLNDLAGVLPEEALKALNDDPANAFLALDQQIAQRLQQL 807
                LE + Q L   ++  + G   L  +L +EA +        A L+  +    +++QL
Sbjct: 669  TLESLETELQTLRATQRQQETGREHLRRLLQDEARQ---QGELKAQLSASK---AKVEQL 722

Query: 808  EQRKDELEEQQARQTQLDKLRDQQ--QARVQGQQQLQQKLAALDEQRQQALASLAELLGE 865
              R+  L+E+ A   +   L  +Q  +AR+  Q+ L     ALD ++++ L +  + L E
Sbjct: 723  TLRRTRLDEEVAEMGEQRALEHEQIGEARLHLQEALDS--MALDTEQRELLLAQRDSLRE 780

Query: 866  HAS--AEAWQQHMDTA------LEHARTLDADTAQRLQDLRTQGVQLASELKANTQQQQA 917
                  +  +QH D A      L   +   A TAQ L+ L  Q  +L  + +  +   + 
Sbjct: 781  RLDRVRQEARQHKDHAHQLAVRLGSLKAQHASTAQALERLEMQSERLTEKREQLSLNLEE 840

Query: 918  LDAECQQLQAQIAQWRSEHPELDDAGLDRLLAMDDAQVNELRQRLQGAEKAIEQGRVLL- 976
             +A  ++L+ ++ +   +   +D+      +A++DA   ELR   +   +A +Q +++  
Sbjct: 841  GEAPLEELRLKLEELLDKRMTVDEELKTAQIALEDAD-RELRDAEKRRTQAEQQSQLIRG 899

Query: 977  QEREQRLQHHAAQMTVDTTVQALEQALAELRERLANHEQQCAELRAQQADDQ---RRQQA 1033
            Q  +QR++  A  +   T    L +   +L   L     Q  E  A++  ++   R Q+ 
Sbjct: 900  QLEQQRMEWQALTVRRKTLQDQLLEDGYDLHGVLNTLTAQANEKEAEEELERIAARIQRL 959

Query: 1034 HQALAAEIEQAHQQWQRWARLNA----LIGSAS--GDVFRKIAQ--GYNLDLLLHHANAQ 1085
                 A I++  QQ +R   L+A    L+ +     +V RKI +             N+ 
Sbjct: 960  GAINLAAIDEYQQQSERKRYLDAQDADLVEALDTLENVIRKIDKETRNRFKDTFDQINSG 1019

Query: 1086 LRQLARRYRLKRGGSA-----------LGLLVLDTEMGDELRSVHSLSGGETFLVSLALA 1134
            L+ L    ++  GGSA            G+ ++    G +  ++H LSGGE  L +LAL 
Sbjct: 1020 LQALFP--KVFGGGSAYLELTGEDLLDTGVTIMARPPGKKNSTIHLLSGGEKALTALALV 1077

Query: 1135 LGL 1137
              +
Sbjct: 1078 FAI 1080