Pairwise Alignments

Query, 1214 a.a., Exonuclease SbcC from Pseudomonas putida KT2440

Subject, 1043 a.a., exonuclease SbcC from Enterobacter asburiae PDN3

 Score =  352 bits (902), Expect = e-100
 Identities = 379/1257 (30%), Positives = 532/1257 (42%), Gaps = 276/1257 (21%)

Query: 1    MKILAIRLKNLASLAGPIDIDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGTVPR 60
            MKIL++RLKNL SL G   IDFTAEP AS GLFAITG TGAGK+TLLDA+CLAL+   PR
Sbjct: 1    MKILSLRLKNLNSLKGEWKIDFTAEPFASNGLFAITGATGAGKTTLLDAICLALYHETPR 60

Query: 61   LNAIGREAKVPDADGDIPTSDPRNLLRRGTGSGFAEVDFVGIDGRRYRARWEANRARDKA 120
            L       KV  A  D+ T D        T    AEV+F  + G  YRA W  NRAR++ 
Sbjct: 61   LQ------KVSQAQNDLMTRD--------TAECLAEVEFE-VKGTAYRAFWSQNRARNQP 105

Query: 121  NGKLQHSRQSFYDLDSEQVLGSGKNEYKQLVEARLGLNFEQFTRAVMLAQSEFGAFLKAD 180
            +G LQ  R                                     V LA+ E G  L   
Sbjct: 106  DGNLQAPR-------------------------------------VELARCEDGKILA-- 126

Query: 181  DKDRSELLEKLTNTAIYTRLGQRAFSKAREAGEAHNALKERASHLLPMAAEARAELDQRL 240
                 ++ +KL  TA  T L    F+++    +               AA   A+   R 
Sbjct: 127  ----DKVTDKLEQTAALTGLDYGRFTRSMLLSQGQ------------FAAFLNAKPSDRA 170

Query: 241  EQAQQQFKADQAGERQLEQQRNWLNEQRQLQAQHTEASTTLQAAELDWQQLAEPRLDLAR 300
            E  ++    +  G+               +  +H  A + L+  E     +         
Sbjct: 171  ELLEELTGTEIYGQISA-----------MVFEKHKAARSVLEKCEAQAAGVV-------- 211

Query: 301  LERLAPQRHQFHRRQALSAQLAPVAAKIAEQQQQQAELQVRTRELEQALDTARQALADRQ 360
               L  +  Q   +Q+L A        + +QQ+QQ + Q  TR  E  L+  R     +Q
Sbjct: 212  ---LLSEEQQQQLQQSLQALTDEEKTLLVQQQRQQKDFQWLTRHDELVLEQQRVTAMQQQ 268

Query: 361  AEHG--ENAPRLRQAFAAQDT--LARLDQELAAQRSISQQAQQQVADGQQQLQ------- 409
            A+      AP L +   A     L  L +    Q +   Q QQ++ +   +LQ       
Sbjct: 269  AQQALTNAAPELAKLQLALPAAQLRPLWEHQQEQTARLTQTQQRIIEVNTRLQAKTALRA 328

Query: 410  QLEDNQQRSVQQLALIDTALADSQHLAGLANAWHAYLPQLKQVMLIGGRLTKGREELPGL 469
            ++    QR+ QQL    TALA              +L + ++  L+G       +E+ G 
Sbjct: 329  RIRHTAQRNHQQLQTELTALAQ-------------WLAENERYRLLG-------QEIAGW 368

Query: 470  QAQASQAN------ARLQAERDAYDLLFREAKAEPQALAEQIDLLGGMLQDNRKQQRAVE 523
            +AQ SQ N      A L A+    +L  R A+    AL    D +   ++   + +   +
Sbjct: 369  RAQFSQLNRDKTQLASLAAKMS--ELRNRLAEMPENALTLTADEVSAAMEQQSRSRTLRQ 426

Query: 524  EMSRLHGREQELRQQLDALRERQQQAMLQRQQLITEGTAAKAELEAAEQALTLTRQLLER 583
             ++ LH R Q L+++L     RQ    +Q+         A+A+     + LTL RQ  + 
Sbjct: 427  RLTSLHARYQPLQKRL-----RQSGESVQK---------AEADQYKLNETLTLRRQQYKE 472

Query: 584  QRLARNTSVEELRNQLRDGEPCPVCGSAEHPFHQPEALLQSLGRHDQAEEHAAQKQVETL 643
            +                               HQ    L++L      E  A  K +E+ 
Sbjct: 473  K-------------------------------HQHYLDLKAL-----CEREATIKDLESY 496

Query: 644  NSKLVELRTQLGVVNAQLKDFQQQQQRLGEQLQPLVAQVQAHSLWPALAPQDDKARSAWL 703
             S+L               +  +     G    P V Q Q+  L       D++ R   L
Sbjct: 497  RSRL---------------EAGKPCPLCGSSEHPAVEQYQSLEL------TDNQRRRDPL 535

Query: 704  DSQLRRLDEEISQDEKRQSALLALQRDAARLNQQLQAAHDAQQQAQRHLEQQHQALANDE 763
            + ++  L EE          LL L +  A L QQ+Q   D  Q     L Q+ QAL  + 
Sbjct: 536  EKEVAALKEE---------GLLVLGQVNA-LTQQIQRETDEAQT----LSQEQQALTKEW 581

Query: 764  QLLQQGLNDLAGVLPEEALKALNDDPANAFLALDQQIAQRLQQLEQRKDELEEQQARQTQ 823
                            EA  +LN       L + + I   + + EQ + +L +   R T 
Sbjct: 582  M---------------EACTSLN-----IALNIQEDITPWMNEQEQYERQLYQLSQRLTL 621

Query: 824  LDKLRDQQQARVQGQQQLQQKLAALDEQRQQALASLAELLGEHASAEAW----------- 872
             ++L DQ+    Q QQQL     AL+      L SL+  + E  +  AW           
Sbjct: 622  QNQLNDQEVQERQHQQQLTAARQALES----TLLSLSLNVPEDGNEAAWLHAREAEFAQW 677

Query: 873  ---QQHMDTALEHARTL-------------DADTA--QRLQDLRTQGVQLASELKANTQQ 914
               Q H    LE    L             +A+ A     +D+  + V L S+L A  QQ
Sbjct: 678  QEKQTHHGVLLERINALKPLLDTLPETNGEEAEPAIPDGWRDVHDECVSLQSQLTAQQQQ 737

Query: 915  QQALDAECQQLQAQIAQWRSEHPELD-DAGLDRLLAMDDAQVNELRQRLQGAEKAIEQGR 973
            +       QQ Q Q     S     D DA L  LL  DD  +  L Q  Q  E  I+Q  
Sbjct: 738  ENLEQERLQQSQTQFTAALSASCFADRDAFLAALL--DDDAIRRLEQLKQSLENQIQQAA 795

Query: 974  VLLQEREQRLQHHAAQMT--VDTTVQALEQALAELRERLANHEQQCAELRAQQADDQRRQ 1031
             L  +  Q+LQ H A     +D    AL+  L +L +RL  +     E+R Q   D   +
Sbjct: 796  ALCGQANQQLQAHLALRPEGLDADAPALQSQLQQLAQRLRENTTHQGEIRQQLKQDSDNR 855

Query: 1032 QAHQALAAEIEQAHQQWQRWARLNALIGSASGDVFRKIAQGYNLDLLLHHANAQLRQLAR 1091
            Q   AL  +IE+A +Q   W  LNALIGS++GD FRK AQG  LD L+  AN QL +L  
Sbjct: 856  QHQLALMQQIEEAARQADDWGYLNALIGSSTGDKFRKFAQGLTLDNLVWLANQQLNRLHG 915

Query: 1092 RYRLKRGGS-ALGLLVLDTEMGDELRSVHSLSGGETFLVSLALALGLASMASSTLRIESL 1150
            RY L+R  S AL L V+DT   D +R   +LSGGE+FLVSLALAL L+ + S   RI+SL
Sbjct: 916  RYLLQRKASDALELEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSL 975

Query: 1151 FIDEGFGSLDPESLQLAMDALDGLQAQGRKVAVISHVQEMHERIPVQIQVRRQGNGL 1207
            F+DEGFG+LD E+L  A+DALD L A G+ + VISHV+ M ERIPVQI+V++  NGL
Sbjct: 976  FLDEGFGTLDSETLDTALDALDALNATGKTIGVISHVEAMKERIPVQIKVKKI-NGL 1031