Pairwise Alignments

Query, 1214 a.a., Exonuclease SbcC from Pseudomonas putida KT2440

Subject, 1227 a.a., AAA family ATPase from Dickeya dianthicola ME23

 Score =  478 bits (1230), Expect = e-138
 Identities = 421/1286 (32%), Positives = 617/1286 (47%), Gaps = 140/1286 (10%)

Query: 1    MKILAIRLKNLASLAGPIDIDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGTVPR 60
            MKIL++RLKNL SL G   IDFT EP AS GLFAITGPTGAGK+TLLDA+CLAL+   PR
Sbjct: 1    MKILSLRLKNLNSLQGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHQTPR 60

Query: 61   LNAIGREAKVPDADGDIPTSDPRNLLRRGTGSGFAEVDFVGIDGRRYRARWEANRARDKA 120
            L       KV  +  ++ T        R T    AEV+F  +    YRA W   RA +  
Sbjct: 61   L-------KVGPSQNELMT--------RHTAECLAEVEFE-VKNVAYRAFWSQRRAHNSP 104

Query: 121  NGKLQHSRQSFYDLDSEQVLGSGKNEYKQLVEARLGLNFEQFTRAVMLAQSEFGAFLKAD 180
             G LQ  +         ++L    N+   +     GL+F++FT+++ML+Q +F AFL AD
Sbjct: 105  EGNLQPPKVELALCADGKILTDKVNDKLTMTADITGLDFDRFTKSMMLSQGQFAAFLNAD 164

Query: 181  DKDRSELLEKLTNTAIYTRLGQRAFSKAREAGEAHNALKERASHLLPMAAEARAELDQRL 240
               R+ELLE+LT T IY ++ +R F K ++A      L+ + + L  ++ E R  L+Q+L
Sbjct: 165  ANQRAELLEELTGTDIYGQISERVFEKHKDAQNQLETLRAQVATLELLSDEQRQALEQQL 224

Query: 241  EQAQQQFKADQAGERQLEQQRNWLNEQRQLQAQHTEASTTLQAAELDWQQLAEPRLD-LA 299
            +  +QQ ++      ++   + W +   Q Q    +A     A E   QQ ++P+LD L 
Sbjct: 225  DAIRQQEQSLSLHREEVLGHQRWYDTLLQHQQAQQQAQQQCAAQE-QVQQQSQPQLDKLQ 283

Query: 300  RLERLAPQRHQFHRR-------QALSAQLAPVAAKIAEQQQQQAELQVRTRELEQALDTA 352
            R E     R +F  R       Q L+ QL     +I  QQ     L+V   +LE+AL T 
Sbjct: 284  RSEPAEKLRPRFDERERALREKQRLTQQLNSARQQIDRQQDALNLLKV---QLEKALSTR 340

Query: 353  RQALADRQAEHGENAPRLRQAFAAQDTLARLDQELAAQRSISQQAQQQVADGQQQLQQ-- 410
            +Q      AEH     R +Q     + +  LD  +A Q++   Q QQQ  D   +LQ+  
Sbjct: 341  QQ-----HAEH-----RQQQETLINERILPLDHHIATQQAQRAQ-QQQALDSLLELQKTL 389

Query: 411  ------LEDNQQRSVQQLALIDTALADS---QHLAGLANAWHAYLPQLKQVMLIGGRLTK 461
                  L+  Q+++ QQLA I+T        QHL      W A  PQ +          K
Sbjct: 390  IAGLTKLQRQQEQTRQQLAEIETYRRQHSRHQHLGSHIPLWQAQFPQQQ----------K 439

Query: 462  GREELPGLQAQASQANARLQAERDAYDLLFREAKAEPQALAEQIDLLGGMLQDNRKQQRA 521
             +++L  LQ + +Q   + +     +  L  + +A+  A      LL   LQ    Q   
Sbjct: 440  WQQDLQVLQEKTAQQQIQAEYLDQQHASLAEKHQAQQSACERARQLLTEHLQ----QDEQ 495

Query: 522  VEEMSRLHGREQELRQQLDALRERQQQA--MLQRQQLITEGTAAKAE-------LEAAEQ 572
            +E    L    Q+L Q++    +RQQ A  +   QQLI++ T  +A+       ++A E 
Sbjct: 496  LEAEQPLADLRQQLAQRMAERPDRQQLATSVAVLQQLISQRTLLEAQQLDTQRRIQALED 555

Query: 573  ALTLTRQLLERQR------------LARNTSVEELRNQLRDGEPCPVCGSAEHP-FHQPE 619
              T  RQ  +RQ                  S+E  R QL+ G+ CP+CGS  HP   + +
Sbjct: 556  QQTQQRQDYQRQADHLTDLDKRHELELHIVSLERERRQLQPGKECPLCGSPHHPAVERYQ 615

Query: 620  ALLQSLGRHDQAEEHAAQKQVETLNSKLVELRTQLGVVNAQLKDFQQQQQRL-GEQLQPL 678
            AL  S     Q   HA +++V+ L + +V+  TQL +   Q +  QQQQ  L G +    
Sbjct: 616  ALRPS---ETQLRLHALRQEVDALKAGVVQTETQLQL---QKQHRQQQQNALDGVRRDDA 669

Query: 679  VAQVQAHSLWPALAPQDDKARSAWLDSQLRRLDEEISQDEKRQSALLALQRDAARLNQQL 738
              ++Q  S+   L    D         QL  L + I + + R+ +L A      R  + +
Sbjct: 670  SLRLQCQSVSKRLLVDFDPL-------QLPALHQWIEESDAREQSLQAQIASRERNQRHI 722

Query: 739  QAAHDAQQQAQRHLEQQHQALANDEQL---LQQGLNDLAGVLP--EEALKALNDDPANAF 793
            Q + D    AQ+ L Q  Q L  + Q    L     +L  +L   E  L+ L+D      
Sbjct: 723  QESKDLLTSAQQLLAQTVQQLELNTQQQTSLHASREELRLLLEKTERELQRLHDSLRQTL 782

Query: 794  LALD---QQIAQRLQQLEQRKDEL-------EEQQARQTQLDKLRDQQQARVQGQQQL-- 841
               D     +AQ+   L QR+ E         EQ   Q QL  L  +  A  Q Q++   
Sbjct: 783  ETFDLTAPTLAQQEDWLRQRQTEWLRWQESEHEQHQCQPQLAALEAEIIASRQRQEETDA 842

Query: 842  -----QQKLAALDEQRQQALASLAELLGEHASAEAWQQ--HMDTALEHARTLDADTAQRL 894
                 QQ+LA      +QA     +L+G  A  +  +Q  H+  ALE     +    Q+ 
Sbjct: 843  AIKTYQQQLADTQRTLEQAQQQRWQLMGNQAVNDVLKQLRHVSQALELE---NQQAQQQW 899

Query: 895  QDLRTQGVQLASELKANTQQQQALDAECQQLQAQIAQWRSEHPELDDAGLDRLLAMDDAQ 954
            Q  ++Q  +L+ E+ +  QQ Q  +   QQLQAQ  +  +     DD    R   +++A+
Sbjct: 900  QQSQSQQSRLSGEIDSLEQQNQHAETTLQQLQAQFGEALAA-AGFDDEAAFRHALLEEAE 958

Query: 955  VNELRQRLQGAEKAIEQGRVLLQEREQRLQHHAA-------QMTVDTTVQALEQALAELR 1007
              +L    +   +  +Q   LLQ+    L+ H A       +   D  ++ L   L ++ 
Sbjct: 959  RQQLLTLKERLSQRRQQVEALLQQANSTLEQHMATRPESMPEGISDWDIRQLISGLGDMV 1018

Query: 1008 ERLANHEQQCAELRAQQADDQRRQQAHQALAAEIEQAHQQWQRWARLNALIGSASGDVFR 1067
            +  A H+    ELR Q A DQ+R+   + L   I +  QQ   W  LN LIGS  GD FR
Sbjct: 1019 KAEAAHQ---GELRQQLASDQQRRDKQRLLLEAIARGQQQCDDWGYLNQLIGSQKGDKFR 1075

Query: 1068 KIAQGYNLDLLLHHANAQLRQLARRYRLKRGGS-ALGLLVLDTEMGDELRSVHSLSGGET 1126
            + AQG  LD L+  AN QL +L  RY L+R  S  L L V DT   D +R   +LSGGE+
Sbjct: 1076 RFAQGLTLDHLVFLANRQLSRLHGRYLLQRKASDTLELQVADTWQADAVRDTRTLSGGES 1135

Query: 1127 FLVSLALALGLASMASSTLRIESLFIDEGFGSLDPESLQLAMDALDGLQAQGRKVAVISH 1186
            FLVSLALAL L+ + S+  RI+SLF+DEGFG+LD E+L  A+D LD L A G+ + VISH
Sbjct: 1136 FLVSLALALALSDLVSTKTRIDSLFLDEGFGTLDGETLDTALDVLDNLNASGKSIGVISH 1195

Query: 1187 VQEMHERIPVQIQVR-RQGNGLSDVE 1211
            V+ M +RI VQI+VR R G G+S ++
Sbjct: 1196 VEAMKDRIQVQIRVRKRNGLGVSQLD 1221