Pairwise Alignments

Query, 1214 a.a., Exonuclease SbcC from Pseudomonas putida KT2440

Subject, 1200 a.a., hypothetical protein from Acinetobacter radioresistens SK82

 Score =  569 bits (1466), Expect = e-166
 Identities = 432/1267 (34%), Positives = 639/1267 (50%), Gaps = 120/1267 (9%)

Query: 1    MKILAIRLKNLASLAGPIDIDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGTVPR 60
            MKI+ ++L+NLASLAG  +I+F A+PL  AGL AITG TGAGKSTLLDA+CLALF  +PR
Sbjct: 1    MKIVRLKLQNLASLAGEQEINFEADPLQHAGLIAITGATGAGKSTLLDAMCLALFNKIPR 60

Query: 61   LNAIGREAKVPDADG-DIPTSDPRNLLRRGTGSGFAEVDFVGIDGRRYRARWEANRARDK 119
            L     E K+ D  G D+      N+LRRGT   ++E++F+  + +RY ARWE  RAR  
Sbjct: 61   LKT--HEGKLKDVSGQDVQIDSTLNILRRGTAHAYSELEFIAQNQKRYIARWELKRARGH 118

Query: 120  ANGKLQHSRQSFYDLDSEQVLGSGKNEYKQLVEARLGLNFEQFTRAVMLAQSEFGAFLKA 179
            A GKLQ  +++   +    +L     E  + V   +GL+FEQFTRAV+LAQSE GAFLKA
Sbjct: 119  AEGKLQAVQRALVCVTDGNMLTDKAKECDKQVLELIGLSFEQFTRAVLLAQSEVGAFLKA 178

Query: 180  DDKDRSELLEKLTNTAIYTRLGQRAFSKAREAGEAHNALKERASHLLPMAAEARAELDQR 239
             D +R++LLE LTN+ I++ +G+ AF + +        L E   H+  ++ E  A+L+  
Sbjct: 179  KDNERADLLEYLTNSNIFSLVGKAAFERTKMVRVQREKLNELIGHVELLSTEQMAQLED- 237

Query: 240  LEQAQQQFKADQAGERQLEQQRNWLNEQRQLQAQHTEASTTLQA------AELDW-QQLA 292
                  Q+KA Q   +QLEQ R  L  + Q    H    T +QA       +LD  Q+L 
Sbjct: 238  ------QYKARQQQVQQLEQHRQILRNELQWHKSHDLLYTQIQAKQEFYQVQLDANQKLG 291

Query: 293  EPRLDLARLERLAPQRHQFHRRQALSAQLAPVAAKIAEQQQQQAELQVRTRELEQALDTA 352
            E R  L +LE+ A  R    +++    QL  +  +I++ QQ   ++  + +  +++   A
Sbjct: 292  EQRQRLQQLEQFASIRPILLQQKRCEQQLQNLEKQISQHQQLFQQVCEQYQAAQKSCQAA 351

Query: 353  RQALADRQAEHGENAPRLRQA--FAAQDTL-----ARLDQELAAQRSISQQAQQQVADGQ 405
            R A+ + +    + AP L QA  F  Q  L      ++  +L  + +  QQ  +Q+   Q
Sbjct: 352  RTAVENEKLRQNQLAPYLNQAKQFLDQRKLIESQYTQVRNKLKEKTAEQQQQLEQLQQAQ 411

Query: 406  QQLQQLEDNQQRSVQQLALIDTALADSQHLAGLANAWHAYLPQLKQVMLIGGRLTKGREE 465
            QQ QQLE+ QQ+  QQLA        SQ L G  +   A L  LK  +            
Sbjct: 412  QQYQQLENIQQQLQQQLA-------QSQQLCGFDSEPQASLQHLKAYI------------ 452

Query: 466  LPGLQAQASQANARLQAERDAYDLLFREAKAEPQALAEQIDLLGGMLQDNRK----QQRA 521
                 AQA QA+  L  +     L  ++   E Q L + +   G   Q  +K     Q+ 
Sbjct: 453  -----AQAQQAS-ELYTQDQIIHLQIQQDSIEQQ-LHKLVQHAGDANQLEQKLRDLYQQR 505

Query: 522  VEEMSRLHGREQELRQQLDALRERQQQAMLQRQQLITEGTAAKAELEAAEQALT------ 575
             +++ R++  EQ L+ QL    ER Q   ++ Q L       K+E++    A+       
Sbjct: 506  EQQLERIYQFEQ-LQHQL----ERWQIHYIEHQSLDQNIHQLKSEIQELHNAMLEQQSAY 560

Query: 576  --------LTRQLLERQRLARNTSVEELRNQLRDGEPCPVCGSAEHPFHQPEALLQS--L 625
                    L ++ L++QRL  + ++E+LR  L+  EPC VCGS +HP+ + + LL+   L
Sbjct: 561  EHDKKERELLQKQLQQQRLLFSENIEQLRAALQPDEPCMVCGSQQHPYREQQHLLEKSLL 620

Query: 626  GRHDQAEEHAAQKQVETLNSKLVELRTQLGVVNAQLKDFQQQQQRLGEQLQPLVAQVQ-- 683
               +Q E++  QK+ E  N  L   R Q       L   QQQQQ   EQ+Q L  Q+Q  
Sbjct: 621  AIQEQQEKNYLQKEQEAQNQWLAA-RQQYLKQETVLSHLQQQQQYSLEQIQQLQQQLQHK 679

Query: 684  -----AHSLWPALAPQDDKARSAWLDSQLR---RLDEEISQDEKRQSALLALQRDAARLN 735
                    LW     Q           QL+   +LD  I++ +K QS    L R   +L 
Sbjct: 680  YSFSGLELLWEQPPEQLLLKLGELQQVQLKVREQLDFNITETQKTQSQYNELVRQLEKLR 739

Query: 736  QQLQAAHDAQQQAQRHLEQQHQALANDEQLLQQGLNDLAGVLPEEALKALNDDPANAFLA 795
             Q   A   QQ A   L++                      LP       +D+       
Sbjct: 740  AQCIRAQQLQQLATPILKK----------------------LPSSQHSDWHDNSLQEAQH 777

Query: 796  LDQQIAQRLQQLEQ---RKDELEEQ----QARQTQLDKLRDQQQARVQGQQQLQQ-KLAA 847
            + Q    RL QLEQ    K  +E+     Q +Q Q   L  Q    VQ +Q+L+Q K   
Sbjct: 778  IYQVFQNRLLQLEQLNTHKGSVEQLNLKLQPQQLQYQYLNTQI---VQLEQELEQLKQQG 834

Query: 848  LDEQRQQALASLAELLGEHASAEAWQQHMDTALEHARTLDADTAQRLQDLRTQGVQLASE 907
            LD   Q    +L      +  A+ W   +   L        +  Q  + L+    Q  S+
Sbjct: 835  LDNVTQVKELTLKVAGQTYEQAQHWLDDLTQQLSILEQSCLEKQQYFEGLQQNYQQQQSK 894

Query: 908  LKANTQQQQALDAECQQLQAQIAQWRSEHPELDDAGLDRLLAMDDAQVNELRQRLQGAEK 967
            +      +Q +  E   + AQ+  W ++HP+     ++ L+  D  +   +RQ +Q  ++
Sbjct: 895  ISQFQATRQHVQQEYTNIYAQVQHWLNDHPDYSPELIEFLVLQDATEEQRIRQLIQANDR 954

Query: 968  AIEQGRVLLQEREQRLQHHAAQMTVDTTVQALEQALAELRERLANHEQQCAELRAQQADD 1027
             + + +  L   +++ + H A        Q L+  L  L  +L +  Q+  +LR +    
Sbjct: 955  GLSEAKTALNTLQEQFEQHLATKPAHEFEQ-LQNLLENLEIQLEHTYQERDQLRTKLEIQ 1013

Query: 1028 QRRQQAHQALAAEIEQAHQQWQRWARLNALIGSASGDVFRKIAQGYNLDLLLHHANAQLR 1087
            Q      Q    +I Q  Q+  RW+R++ LIGSA G  F+K+AQ ++LD+L+ +AN QL+
Sbjct: 1014 QHNLHKQQQFQKQIVQVQQEEYRWSRISELIGSADGARFKKLAQEHHLDILVEYANQQLQ 1073

Query: 1088 QLARRYRLKRGGSALGLLVLDTEMGDELRSVHSLSGGETFLVSLALALGLASMASSTLRI 1147
             LA RY+L+R   +LGL ++D  M  E+R V SLSGGETFLVSLALAL +A+MAS +++I
Sbjct: 1074 PLAPRYQLQRIEDSLGLAIIDHHMNGEVRPVLSLSGGETFLVSLALALAIANMASGSMKI 1133

Query: 1148 ESLFIDEGFGSLDPESLQLAMDALDGLQAQGRKVAVISHVQEMHERIPVQIQVRRQGNGL 1207
            ESLFIDEGFG+LDP SL + MDALD LQ QGRKV +ISHVQEMHERIP+QIQV+  G+G 
Sbjct: 1134 ESLFIDEGFGTLDPASLHVVMDALDRLQGQGRKVTLISHVQEMHERIPIQIQVKAVGSGA 1193

Query: 1208 SDVEVCG 1214
            S +++ G
Sbjct: 1194 SRIQIVG 1200