Pairwise Alignments

Query, 799 a.a., adhesin-associated MmpL efflux pump (from data) from Pseudomonas putida KT2440

Subject, 770 a.a., membrane protein from Pseudomonas simiae WCS417

 Score = 52.0 bits (123), Expect = 1e-10
 Identities = 83/394 (21%), Positives = 154/394 (39%), Gaps = 52/394 (13%)

Query: 343 QLFLPGM-IAILADAVGFITLLIIDIGVIRELAIGASIGVAVIVFTNLILLPVAISYVGI 401
           +L LPG+ +++    +G++ L       + ++A+ ++ G+     + + LLP  +   G+
Sbjct: 339 RLTLPGLSLSLATSCIGYLALAWTPFPALTQIAVFSAAGLVGAYLSAVCLLPALLK--GV 396

Query: 402 SKKAIERSKKDATCEHPFWRLLSNFASAKVAPVSVVLALLAFAGGLWYSQNLKIGDLDQ- 460
             +  +   + A C    WR+  +      +PV + L LL  AGGLW+  +    D+ Q 
Sbjct: 397 ELRPAQWPLRIAEC---LWRVRESLLKRVPSPVLLALVLLFCAGGLWHLNSK--NDIRQW 451

Query: 461 -GAPELRPDSRYNQDNNFIISNYSTSSDVLVIMVKTPSEKCSVHSTMAPIDELMWTMENT 519
            GAP   P           I+ +  +S   ++  +   +     S +A   + +  M+  
Sbjct: 452 IGAP---PQLLEEAQAVARITGFQPTSQFFLVRAQDERQLLERQSALAQRLDQLVNMDKL 508

Query: 520 PG---VQSAISLVTVSKQVIKGMNEGSLKWE---TLSRNPDILNNSIARADGLYNGDCSL 573
            G   +   +SL    +Q+   +N  +  W+    L      L   + +   L       
Sbjct: 509 KGYLALNQLVSLPAEQQQLRDALNTLTQHWQPLLALGVPASALQAEVTQLQALPTQTIEA 568

Query: 574 APV---------------------LVFLNDHKAETLERVTAVAKAFADSHDKEGLQFLLA 612
           A V                     +V L       L RV AV        D  G+Q +  
Sbjct: 569 ALVGPLAEPWRTLWLGPVDGGVAAMVSLQGLNNPALLRVQAV--------DLPGVQLVDR 620

Query: 613 AGNAGIEAATNEVIKSAELTILILVYICVAVMCLITFRSFAATLCIVLPLVLTSVLGNAL 672
            G+     A  + I +AEL ++  V I   V+ LI    F   L IV   +L ++   A 
Sbjct: 621 LGDLNRVFADTQ-ISAAELKLMSCVLI---VLLLILPFGFGGALRIVALPLLAALCSLAS 676

Query: 673 MAYMGIGVKVATLPVVALGVGIGVDYGIYIYSRL 706
           + ++G  + + +L  + L   I VDY I +  ++
Sbjct: 677 LGWLGQPLTLFSLFGLLLVTAISVDYAILMREQI 710