Pairwise Alignments

Query, 799 a.a., adhesin-associated MmpL efflux pump (from data) from Pseudomonas putida KT2440

Subject, 791 a.a., RND transporter from Pseudomonas simiae WCS417

 Score = 1359 bits (3518), Expect = 0.0
 Identities = 682/791 (86%), Positives = 737/791 (93%)

Query: 9   MHPHHQDKATLLERLIFNNRPVVIALCVLVSIFLFWQATQIRPSTSFEKMIPLQHPFIEQ 68
           M  HH DKAT LERLIFNNRP VI +C+LVSIFLFWQAT IRPSTSFEKMIPL+HPFIE+
Sbjct: 1   MSSHHNDKATFLERLIFNNRPAVIVICLLVSIFLFWQATLIRPSTSFEKMIPLKHPFIEK 60

Query: 69  MMEHRNDLANLGNTVRISVEAVNGDIFDKDYMETLRQIHDEVFYIPGVDRAGLKSLWSPS 128
           MMEHRNDLANLGNTVRISVEA +GDIF K+YMETLRQI+DEVFYI GVDR+GLKSLWSPS
Sbjct: 61  MMEHRNDLANLGNTVRISVEAKDGDIFTKEYMETLRQINDEVFYISGVDRSGLKSLWSPS 120

Query: 129 VRWSEVTEEGFSGGEVIPNTYNGSQDSLDTLRDNVLKSGQVGRLVGNNFKSSIVDVPLLE 188
           VRW+EVTEEGF+GGEVIP +YNGS +SLD LR+NVLKSGQVGRLV N+FKSSIVD+PLLE
Sbjct: 121 VRWTEVTEEGFAGGEVIPQSYNGSPESLDQLRNNVLKSGQVGRLVANDFKSSIVDIPLLE 180

Query: 189 SYPDPQDPGKQVKLDYQQFSHLLEEKIRDKFQAQNPNVKIHIVGFAKKVGDLIDGLVMVA 248
           SYPDPQD GK + LDY++FSH LE+KIR KFQ QNPNV+IHIVGFAKKVGDLIDGL+MV 
Sbjct: 181 SYPDPQDQGKLLALDYRKFSHELEDKIRTKFQEQNPNVQIHIVGFAKKVGDLIDGLIMVV 240

Query: 249 MFFGVALVITLVLLYWFTWCIRSTVAVLITTLVAVVWQLGLMHAVGFGLDPYSMLVPFLI 308
           +FFGVA  ITLVLL WFT C+RST+AVL TTLVAVVWQLGLMHA GFGLDPYSMLVPFLI
Sbjct: 241 LFFGVAFGITLVLLLWFTNCLRSTIAVLSTTLVAVVWQLGLMHAAGFGLDPYSMLVPFLI 300

Query: 309 FAIGISHGVQKINGIALQSSDADNALTAARRTFRQLFLPGMIAILADAVGFITLLIIDIG 368
           FAIGISHGVQKINGIALQSS+ADNALTAARRTFRQLFLPGMIAILADAVGFITLLIIDIG
Sbjct: 301 FAIGISHGVQKINGIALQSSEADNALTAARRTFRQLFLPGMIAILADAVGFITLLIIDIG 360

Query: 369 VIRELAIGASIGVAVIVFTNLILLPVAISYVGISKKAIERSKKDATCEHPFWRLLSNFAS 428
           VIRELAIGASIGVAVIVFTNLILLPVAISYVGISK+AI +SKKDA  EHPFWRLLS FAS
Sbjct: 361 VIRELAIGASIGVAVIVFTNLILLPVAISYVGISKRAIAKSKKDANREHPFWRLLSKFAS 420

Query: 429 AKVAPVSVVLALLAFAGGLWYSQNLKIGDLDQGAPELRPDSRYNQDNNFIISNYSTSSDV 488
            KVAPVSV LAL+AF GGLWYSQNLKIGDLDQGAPELRPDSRYN+DNNFIISNYSTSSDV
Sbjct: 421 PKVAPVSVFLALIAFGGGLWYSQNLKIGDLDQGAPELRPDSRYNKDNNFIISNYSTSSDV 480

Query: 489 LVIMVKTPSEKCSVHSTMAPIDELMWTMENTPGVQSAISLVTVSKQVIKGMNEGSLKWET 548
           LV+MVKT +E CS +  MAPID+LMW M+NT GVQSAISLVTVSKQ+IKGMNEG+LKWET
Sbjct: 481 LVVMVKTKAEGCSRYEAMAPIDQLMWKMQNTEGVQSAISLVTVSKQMIKGMNEGNLKWET 540

Query: 549 LSRNPDILNNSIARADGLYNGDCSLAPVLVFLNDHKAETLERVTAVAKAFADSHDKEGLQ 608
           LSRNPD+LNNSIARADGLYN +CSLAPVLVFLNDHKAETL+R     + FA  ++K+GL+
Sbjct: 541 LSRNPDVLNNSIARADGLYNNNCSLAPVLVFLNDHKAETLDRAVHAVQDFAKENNKDGLE 600

Query: 609 FLLAAGNAGIEAATNEVIKSAELTILILVYICVAVMCLITFRSFAATLCIVLPLVLTSVL 668
           F+LAAGNAGIEAATNEVIK +ELTILILVY+CVA MC+ITFRS+AATLCIVLPLVLTSVL
Sbjct: 601 FILAAGNAGIEAATNEVIKESELTILILVYLCVATMCMITFRSWAATLCIVLPLVLTSVL 660

Query: 669 GNALMAYMGIGVKVATLPVVALGVGIGVDYGIYIYSRLESFLRAGLPLQEAYYQTLRSTG 728
           GNALMA+MGIGVKVATLPVVALGVGIGVDYGIYIYSRLESFLRAGLPLQEAYYQTL+STG
Sbjct: 661 GNALMAFMGIGVKVATLPVVALGVGIGVDYGIYIYSRLESFLRAGLPLQEAYYQTLKSTG 720

Query: 729 KAVLFTGLCLAIGVCTWIFSAIKFQADMGLMLTFMLLWNMFGALWLLPALARFLIKPEKM 788
           KAVLFTGLCLAIGVCTWIFSAIKFQADMGLMLTFMLLWNMFGALWLLPALARFLIKPEK+
Sbjct: 721 KAVLFTGLCLAIGVCTWIFSAIKFQADMGLMLTFMLLWNMFGALWLLPALARFLIKPEKL 780

Query: 789 VGKEGGSIFAH 799
            G++G S+FAH
Sbjct: 781 AGQKGNSLFAH 791