Pairwise Alignments

Query, 295 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

Subject, 516 a.a., Uncharacterized membrane protein (homolog of Drosophila rhomboid) from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 54.3 bits (129), Expect = 6e-12
 Identities = 46/155 (29%), Positives = 77/155 (49%), Gaps = 17/155 (10%)

Query: 145 GQWWRLVSPMLLHFGVLHLAMNSLWYWELGKRIELRQGPWALLGLTLLF------SLVSN 198
           G++WRL + + +H G++HL MN    + LG    L +G   +LG T L        ++++
Sbjct: 364 GEYWRLFTSIFIHGGLMHLFMN---LFGLGLGASLLEG---ILGRTQLIISFIVCGILAS 417

Query: 199 LAQHYTSGPSLFGGLSGVLYGLLGHIWLYQWLAPDRYFNLPKGVLVMMLIWLVVCLTGVV 258
           +A  Y    ++  G SG ++GL G I  +      + +      +  ML+ L   L+ + 
Sbjct: 418 IASIYWHENTVSVGASGAIFGLYGLILAFTVF---KIYPTHMRGMTWMLLGLYAGLSLLF 474

Query: 259 GTLGLGQIANAAHVGGLLIGCLTGLLGGALARRKL 293
           G   LG I NAAH GGL+ G + G +   + + KL
Sbjct: 475 GF--LGGIDNAAHFGGLISGFILGGILILIEKEKL 507