Pairwise Alignments

Query, 346 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 330 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  115 bits (288), Expect = 2e-30
 Identities = 88/318 (27%), Positives = 139/318 (43%), Gaps = 6/318 (1%)

Query: 22  ALRELGHDPEPLLRRYGLDATRLSEAGARLSIPRYMHMGHAAIEMSGEAALGLRMGRLSR 81
           A +  G   E LL   G+ A  LS A A ++  + M +   A+ +  +  +GL +GR   
Sbjct: 18  AFKAEGLPAETLLAGSGICAADLSRADACITTNQEMRVCTNAVALRRD--IGLELGRKMH 75

Query: 82  LAHTGLAGVTAAQAPTLGEAARTLLRFEPLYAANYRGHSRFEEDAQGAWLRFYSISPYND 141
           ++  G+ G       T G+A R  LR+  L    +      E D +  WL          
Sbjct: 76  VSSYGMLGYALLTCATFGDALRLALRYPALLGTLFE--LSLENDGERIWLTAADYRETPA 133

Query: 142 YNRFVVDSLLAGWLAQLAELAGTPVQAERLEIEFAAPSYAARYQPLCSTPVQFAADGNQL 201
              F V+  L        +L G P+       E++AP Y ARY    +  + F A  N  
Sbjct: 134 LEMFNVEFCLVSLKIICDDLLGQPLPLLGARFEYSAPDYHARYHECFACSLHFEASANAF 193

Query: 202 RLSRATLQLANPGHCPSTWQHLLQLCEAELLQRTRVRSLGERITHLLGPLLNGGREPDLE 261
              +  L    P     T Q +   C  + L+ T  ++   RI HLL   L+    P +E
Sbjct: 194 AFDKRWLDQPLPLADAVTHQAMTDRCRKQNLEFTGRQAWLGRIRHLLAAQLHAA--PGIE 251

Query: 262 EVALHLQLPSWTLRRKLAEEGTRFRDLLNETRRDLAETYIRDTALAFGEIAYLLGFASAE 321
            +A  +   + TLRR L + G+ +++LL+E R + A+  +    L    IA  LGF+   
Sbjct: 252 GLAAQMNCSARTLRRHLHDLGSSYQELLDELRFERAKQLLGQDELPIYRIAEQLGFSETA 311

Query: 322 AFQRAFKRWTGLTPGEFR 339
           +F+ AF RW+G+ P +FR
Sbjct: 312 SFRHAFVRWSGVAPSQFR 329