Pairwise Alignments

Query, 346 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 352 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  140 bits (354), Expect = 4e-38
 Identities = 107/332 (32%), Positives = 156/332 (46%), Gaps = 12/332 (3%)

Query: 12  SVGFVQPLSEALRELGHDPEPLLRRYGLDATRLSEAGARLSIPRYMHMGHAAIEMSGEAA 71
           S  +   + +AL   G D   L ++ GLD   LS+  AR        +   A+E+SG  A
Sbjct: 7   SASWAMGIVKALEMDGLDCRALFKQLGLDYAALSDPDARFPQDSMTRLWQRAVELSGNPA 66

Query: 72  LGLRMGRLSRLAHTGLAGVTAAQAPTLGEAARTLLRFEPLYAANYRGHSRFEEDAQGAWL 131
           +GL MG++ R A   +AG     + TL E    L+R++ + A +     R   +     L
Sbjct: 67  IGLNMGKVVRPASFHVAGYALMSSNTLAEGFMRLVRYQRIIAESADLSFRLVPEGYALIL 126

Query: 132 RFYSISPYNDYNRFVVDSLLAGWLAQLAELAGTPVQAERLEIEFAAPSYAARYQPLCSTP 191
             +    +    R   ++ LA  LA    L G  +Q  ++ ++   P+  A Y+     P
Sbjct: 127 TVHG--DHLPPTRQSAEASLASALALCGWLTGRTLQPRKVVLQGEQPADLAPYKQAFHAP 184

Query: 192 VQFAADGNQLRLSRATLQLANPGHCPSTWQHLLQLCEAELLQRTRVRSLGERITH----L 247
           ++F A  + L   RA +    P     T    + L           R    R+TH    +
Sbjct: 185 LEFNAPYDALIFERADMDAPLP-----TANEAMALLHDRFAGEYLARFSESRVTHKARQV 239

Query: 248 LGPLLNGGREPDLEEVALHLQLPSWTLRRKLAEEGTRFRDLLNETRRDLAETYIRDTALA 307
           L  LL  G EP  E VA  L L   TL+R+L EEGT F+ LL++TRR+LAE Y+   ++ 
Sbjct: 240 LCRLLPQG-EPKREVVAQALHLSQRTLQRRLQEEGTSFQTLLDDTRRELAEQYLAQPSMT 298

Query: 308 FGEIAYLLGFASAEAFQRAFKRWTGLTPGEFR 339
             EIAYLLGFA    F RAF+RW   TPGE+R
Sbjct: 299 LLEIAYLLGFADPSNFFRAFRRWFDATPGEYR 330