Pairwise Alignments

Query, 346 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 342 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  482 bits (1240), Expect = e-141
 Identities = 241/338 (71%), Positives = 279/338 (82%), Gaps = 2/338 (0%)

Query: 6   VRLGELSVGFVQPLSEALRELGHDPEPLLRRYGLDATRLSEAGARLSIPRYMHMGHAAIE 65
           VRLG+LSVGFV  L++A+   G DP+PLL +YGLD  RL+EAGARLSIPRYM +GHAAI+
Sbjct: 4   VRLGDLSVGFVHALADAIHSHGLDPQPLLLQYGLDPARLAEAGARLSIPRYMRLGHAAIQ 63

Query: 66  MSGEAALGLRMGRLSRLAHTGLAGVTAAQAPTLGEAARTLLRFEPLYAANYRGHSRFEED 125
           ++G+  LGLRMG+LSRL+  GLAGVTAAQAP + EAAR L RFE LY +NYRG S F ED
Sbjct: 64  LTGDPGLGLRMGQLSRLSQGGLAGVTAAQAPNVREAARALTRFEALYGSNYRGQSSFVED 123

Query: 126 AQGAWLRFYSISPYNDYNRFVVDSLLAGWLAQLAELAGTPVQAERLEIEFAAPSYAARYQ 185
           A+GAWLRFYSISPYN YNRFVVDS++AGWL QL+ LA  PVQA+R++IEF AP Y+ +Y 
Sbjct: 124 AEGAWLRFYSISPYNAYNRFVVDSIIAGWLQQLSSLAQQPVQAQRIDIEFEAPEYSDQYS 183

Query: 186 PLCSTPVQFAADGNQLRLSRATLQLANPGHCPSTWQHLLQLCEAELLQRTRVRSLGERIT 245
            L    V F A+ NQLRL++ TL L NP HCPSTW  LLQLCE EL+Q TR RSL ERIT
Sbjct: 184 VL--GDVHFGAEANQLRLNQQTLALRNPQHCPSTWNLLLQLCERELVQLTRTRSLRERIT 241

Query: 246 HLLGPLLNGGREPDLEEVALHLQLPSWTLRRKLAEEGTRFRDLLNETRRDLAETYIRDTA 305
            LLGP+LNGGREPDLEEVA  L+LP+WTLRRKLA+EGT+FR +LN+TRRDLA TYIRDT 
Sbjct: 242 RLLGPMLNGGREPDLEEVAARLKLPTWTLRRKLADEGTQFRAILNDTRRDLAMTYIRDTE 301

Query: 306 LAFGEIAYLLGFASAEAFQRAFKRWTGLTPGEFRRSQR 343
           LAFGEIAYLLGFASA+AFQRAF+RW   TPGEFRRSQR
Sbjct: 302 LAFGEIAYLLGFASAQAFQRAFRRWNNQTPGEFRRSQR 339