Pairwise Alignments

Query, 346 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 341 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

 Score = 94.7 bits (234), Expect = 3e-24
 Identities = 84/308 (27%), Positives = 134/308 (43%), Gaps = 7/308 (2%)

Query: 33  LLRRYGLDATRLSEAGARLSIPRYMHMGHAAIEMSGEAALGLRMGRLSRLAHTGLAGVTA 92
           +L   G+D   L+E  AR+S   Y  +       + +   G+   +L   +   L     
Sbjct: 29  VLHDAGIDPQWLAEPTARVSATTYARLWRLLARRTDDEFFGMDPRKLKSGSLAFLCRAAM 88

Query: 93  AQAPTLGEAARTLLRFEPLYAANYRGHSRFEEDAQGAWLRFYSISPYNDYNRFVVDSLLA 152
           AQ PTL  +  T L F  L           ++      L      P   +  F    ++ 
Sbjct: 89  AQ-PTLATSLETALGFLSLMLERMPAELVRQQSLAEIVLVEPEAEPNRAFTYFTYWMIVH 147

Query: 153 GWLAQLAELAGTPVQAERLEIEFAAPSYAARYQPLCSTPVQFAADGNQLRLSRATLQLAN 212
           G    LA   G  +    +E+  A P + A YQ + S  ++F     ++  S   L L  
Sbjct: 148 GVACWLA---GRRIPILAIELRCAKPDFCADYQVMFSDNLRFDRPRTRMIFSADCLDLPI 204

Query: 213 PGHCPSTWQHLLQLCEAELLQRTR-VRSLGERITHLLGPLLNGGREPDLEEVALHLQLPS 271
               P   +  L    A +L + R   SL  RI H L  L      P+ E +A+ L + +
Sbjct: 205 K-RTPEELKRFLAHAPANILVKYRDPDSLATRIKHDLRQL-PPHTWPETEGLAVSLCISA 262

Query: 272 WTLRRKLAEEGTRFRDLLNETRRDLAETYIRDTALAFGEIAYLLGFASAEAFQRAFKRWT 331
            TLRR+LAEEG  ++ L +  R++LA  ++ +  ++F EIA  LGFA   +F +AF++W+
Sbjct: 263 STLRRRLAEEGQTYQGLKDSVRKELAIVWLAEPQISFAEIAERLGFADTSSFYKAFRKWS 322

Query: 332 GLTPGEFR 339
           G  PG +R
Sbjct: 323 GSNPGHYR 330