Pairwise Alignments

Query, 346 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 334 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  109 bits (273), Expect = 9e-29
 Identities = 93/334 (27%), Positives = 148/334 (44%), Gaps = 14/334 (4%)

Query: 15  FVQPLSEALRELGHDPEPLLRRYGLDATRLSEAGARLSIPRYMHMGHAAIEMSGEAALGL 74
           + + L + L  LG D   L  + GLD  ++ +  AR  +     +   A++ SG+ A+GL
Sbjct: 10  WTRALRKQLDALGLDSAALCLQAGLDPQKMDDPNARYPLSATTRLWELAVQASGDPAIGL 69

Query: 75  RMGRLSRLAHTGLAGVTAAQAPTLGEAARTLLRFEPLYAANYRGHSRFEEDAQGAWLRFY 134
           R+ R          G     + +L E    ++R+  + +         E    G   RF 
Sbjct: 70  RVSRFVSATTFHALGYALVASGSLREVFERIVRYHQVVSDALS----LELSGDGERYRFR 125

Query: 135 SIS-PYNDYNRF-VVDSLLAGWLAQLAELAGTPVQAERLEIEFAAPSYAARYQPLCSTPV 192
            +  P +    F  +D+  A ++       G       + +    P     +  +   PV
Sbjct: 126 LLQLPGSPAPAFEAIDAFAAIYVRTCRNRLGREYAPLAVYLRRPEPVDPKPWHTVFRAPV 185

Query: 193 QFAADGNQLRLSRATLQLANPGHCPSTWQH---LLQLCEAELLQRTRVRSLGERITHLLG 249
            F A+ ++L  + A          P   +H   +L+   A+L   T  R +   I     
Sbjct: 186 FFDAEEDRLEFAAADFDSHLDDANPELAEHNETVLKRTLAQLQPLTWERKVRAAIE---A 242

Query: 250 PLLNGGREPDLEEVALHLQLPSWTLRRKLAEEGTRFRDLLNETRRDLAETYIRDTALAFG 309
            L +G  EP  E +A  L L   +L+R LA+EG RF  LL+E R +LA  ++RD   +  
Sbjct: 243 QLPDG--EPSAERIAQALHLSLRSLQRHLADEGCRFDALLSECRENLALLHLRDPHCSLA 300

Query: 310 EIAYLLGFASAEAFQRAFKRWTGLTPGEFRRSQR 343
           EI++LLGFA   +F RAFKRWTG+TPG+FR   R
Sbjct: 301 EISHLLGFADTSSFNRAFKRWTGMTPGQFRDGLR 334