Pairwise Alignments

Query, 346 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 344 a.a., Transcriptional regulator, AraC family from Variovorax sp. SCN45

 Score = 95.1 bits (235), Expect = 2e-24
 Identities = 92/340 (27%), Positives = 138/340 (40%), Gaps = 9/340 (2%)

Query: 11  LSVGFVQPLSEALRELGH----DPEPLLRRYGLDATRLSEAGARLSIPRYMHMGHAAIEM 66
           + + FVQ +   L   G     D    L   G++   L   GAR++  +Y+ +    +E 
Sbjct: 8   IPIAFVQGMLSGLLARGQAAPIDARAALEDAGIEPALLEAPGARVTAEQYVALFALLMER 67

Query: 67  SGEAALGLRMGRLSRLAHTGLAGVTAAQAPTLGEAARTLLRFEPLYAANYRGHSRFEEDA 126
             + AL     RL R +   +   T   APT   A R +     L   +       +   
Sbjct: 68  LDDEALCFLSRRLKRGSFALMTRATLG-APTFEVALRRVAHTFSLLQDDLTLVLLQDGPL 126

Query: 127 QGAWLRFYSISPYNDYNRFVVDSLLAGWLAQLAELAGTPVQAERLEIEFAAPSYAARYQP 186
            G  LR    +       F+ + +L  +   LA L G  + A R +  F  P YA  Y  
Sbjct: 127 AGFGLRLNDSAAVQQ--NFLHELMLRVYWRLLAWLHGGRLAARRFDFGFELPPYADGYAK 184

Query: 187 LCSTPVQFAADGNQLRLSRATLQLANPGHCPSTWQHLLQLCEAELLQRTRVRSLGERITH 246
           +   P+QF      +      LQ        +    L       +L R   +++  R+  
Sbjct: 185 VFPGPLQFGQPCTAVWFDAGALQTPVHRDAQAMNAFLAAAPANVILPRLAEQAVSARVRS 244

Query: 247 LLGPLLNGGREPDLEEVALHLQLPSWTLRRKLAEEGTRFRDLLNETRRDLAETYIRDTAL 306
           +L    N     DL   A  L +   TL+R LA EGT F+ L ++ RRDLA   +  + +
Sbjct: 245 VLQQ--NRPAWADLATAASSLHMSVSTLQRHLATEGTSFQSLKDQLRRDLAIVRLNTSTV 302

Query: 307 AFGEIAYLLGFASAEAFQRAFKRWTGLTPGEFRRSQRQPS 346
               +A  LGFA + AFQRAFK WTG  PG +RR +   S
Sbjct: 303 PLAALAEELGFADSAAFQRAFKAWTGGAPGSYRRRRETGS 342