Pairwise Alignments

Query, 346 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 363 a.a., hypothetical protein from Variovorax sp. SCN45

 Score =  107 bits (267), Expect = 5e-28
 Identities = 90/326 (27%), Positives = 143/326 (43%), Gaps = 15/326 (4%)

Query: 22  ALRELGHDPEPLLRRYGLDATRLSEAGARLSIPRYMHMGHAAIEMSGEAALGLRMGRLSR 81
           AL + G     LLR  GLD + L     ++S  +   +   A+ +S         GR   
Sbjct: 29  ALTQSGASASELLRGTGLDESELLSYSRKVSYAQMQTILRNAVALSPGPEAAFEAGRRVS 88

Query: 82  LAHTGLAGVTAAQAPTLGEAARTLLRFE----PLYAANYRGHSRFEEDAQGAWLR---FY 134
           LA  G+ G+    A T  E A  +++++    P+ A ++      E DA   W       
Sbjct: 89  LASLGVWGLGMTSARTYRELAEFVVKYQWVLGPMVAFDFH-----EVDANAWWTYTPLLV 143

Query: 135 SISPYNDYNRFVVDSLLAGWLAQLAELA-GTPVQAERLEIEFAAPSYAARYQPLCSTPVQ 193
           S     +Y   +  +L  G+  +++E+A G   +A  + + + AP++A+ Y+     P+ 
Sbjct: 144 SDPRSTEYQMSMEFALCMGY--RMSEIAFGPGFKALAISLRYDAPAHASLYEHFFGCPIL 201

Query: 194 FAADGNQLRLSRATLQLANPGHCPSTWQHLLQLCEAELLQRTRVRSLGERITHLLGPLLN 253
           F    +      A L+   P     +   +   CE  L + +    +  R+  LL     
Sbjct: 202 FGQPHDGFHFDPALLECELPNANAISMAMVRAGCEVLLKKLSTRGGIEARVRELLSAQRP 261

Query: 254 GGREPDLEEVALHLQLPSWTLRRKLAEEGTRFRDLLNETRRDLAETYIRDTALAFGEIAY 313
                 ++E+A  L +   TL RKL E GT FR L +    D A  Y+RDT L   EIA 
Sbjct: 262 EKPALAVDEIANELDMNPRTLHRKLKEAGTSFRGLRSNVLMDQAIAYLRDTDLTQEEIAA 321

Query: 314 LLGFASAEAFQRAFKRWTGLTPGEFR 339
            LGF+    F++AFKRWT   PG+FR
Sbjct: 322 RLGFSDGSNFRQAFKRWTNRQPGDFR 347