Pairwise Alignments

Query, 346 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 359 a.a., Transcriptional regulator, AraC family from Variovorax sp. SCN45

 Score =  107 bits (268), Expect = 4e-28
 Identities = 99/349 (28%), Positives = 149/349 (42%), Gaps = 26/349 (7%)

Query: 1   MARPRVRLGELSVGFVQPLSEALRELGHDPEPLLRRYGLDATRLSEAGARLSIPRYMHMG 60
           MA+P +R    S  +++ +       G D   LL   G D   L    AR+ +     + 
Sbjct: 15  MAKPELRTS--SAAWLEGVLSMFEAEGLDVPSLLNEAGFDPDSLHRQNARIPVDEITVLW 72

Query: 61  HAAIEMSGEAALGLRMGRLSRLAHTGLAGVTAAQAPTLGEAARTLLRFEPLYAANYRGHS 120
             A+  +G   LGL     S  +  G  G   A +P L  A   + R    Y A     +
Sbjct: 73  QFAVARAGRPTLGLHRDLASTHSKLGTVGHAMACSPDLQGALTRVAR----YMAVISDAT 128

Query: 121 RF--EEDAQGAWLRFYSISPYNDYNRFVVDSLLAGWLAQLAELAGTPVQAERLEIEFAAP 178
            F  + +A+G W+            R  V+  L   L Q   LA   +Q   +E  + AP
Sbjct: 129 AFSLQPEARGCWMVMKHTGGKLPIPRQRVEYALLTVLMQCQWLARRELQPLAMEFVYPAP 188

Query: 179 SYAARYQPLCSTPVQFAADGNQLRLSRATLQLANPGHCPSTWQ---HLLQLCEAELLQRT 235
             A  ++      V+F A  N+L LS A +    P +  +  +   HLL   +  LL +T
Sbjct: 189 PDARLHREAFGCEVRFNASANRLLLSDADMTTPLPTYHQTLGEMQEHLLD-DQLTLLGQT 247

Query: 236 RVRSL-----GERITHLLGPLLNGGREPDLEEVALHLQLPSWTLRRKLAEEGTRFRDLLN 290
           R  SL       R+ H          EP  ++VA  L L   TL+R+L EE   F+ LL+
Sbjct: 248 RTSSLVCAEIARRLPH---------GEPRRQDVASDLGLAERTLQRRLQEESVSFQALLD 298

Query: 291 ETRRDLAETYIRDTALAFGEIAYLLGFASAEAFQRAFKRWTGLTPGEFR 339
            TRR+LA+ Y+ +      ++A +LGF     F RA KRW G+ P ++R
Sbjct: 299 RTRRELAQEYLAEDRHTLTDVADMLGFVDTSNFFRACKRWFGVPPAQYR 347