Pairwise Alignments

Query, 346 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 356 a.a., transcriptional regulator, ornithine utilization from Pseudomonas putida KT2440

 Score =  115 bits (288), Expect = 2e-30
 Identities = 89/316 (28%), Positives = 142/316 (44%), Gaps = 12/316 (3%)

Query: 27  GHDPEPLLRRYGLDATRLSEAGARLSIPRYMHMGHAAIEMSGEAALGLRMGRLSRLAHTG 86
           G +   LL   G+    L  A AR++  + + +   A+    +  +GL +G+  R++  G
Sbjct: 49  GCEASALLAGSGIGPADLGHADARITTQQELQVCANAVARRED--IGLELGQRMRVSCYG 106

Query: 87  LAGVTAAQAPTLGEAARTLLRFEPLYAANYRGHSRFEEDAQGAWLRFYSISPYND---YN 143
           + G     + TLG+A R  L++  L    ++   R  +D Q  W   +S S Y D    +
Sbjct: 107 MLGYALLSSATLGDALRLALQYPALLGTVFK--LRLLDDGQRVW---FSASDYQDSPALS 161

Query: 144 RFVVDSLLAGWLAQLAELAGTPVQAERLEIEFAAPSYAARYQPLCSTPVQFAADGNQLRL 203
            F  +  L        +L G P+       E   P Y A Y      P+ FAA+ N    
Sbjct: 162 AFNAEFCLVSLKVICDDLLGRPLPLLGARFEHPRPGYHALYAGAFQCPIGFAAEDNAFAF 221

Query: 204 SRATLQLANPGHCPSTWQHLLQLCEAELLQRTRVRSLGERITHLLGPLLNGGREPDLEEV 263
            R  L +  P   P T + + + C    L+ T  ++   RI  LL   L+    P LE +
Sbjct: 222 ERRWLDMPLPLADPITHKAMSERCRRLNLEFTGRQAWLGRIRQLLAQQLDAA--PGLEGL 279

Query: 264 ALHLQLPSWTLRRKLAEEGTRFRDLLNETRRDLAETYIRDTALAFGEIAYLLGFASAEAF 323
           A  +   S TLRR L   G+ ++ LL+E R + A+  + D  +    IA  LGF+   +F
Sbjct: 280 ARQMNCSSRTLRRHLQALGSSYQQLLDELRFERAKQLLADEQMPIYRIAETLGFSETASF 339

Query: 324 QRAFKRWTGLTPGEFR 339
           + AF+RW+G+ P  FR
Sbjct: 340 RHAFQRWSGVAPSHFR 355