Pairwise Alignments

Query, 286 a.a., tRNA pseudouridine (38-40)synthase from Pseudomonas putida KT2440

Subject, 270 a.a., tRNA pseudouridine(38-40) synthase TruA from Variovorax sp. OAS795

 Score =  233 bits (593), Expect = 5e-66
 Identities = 120/254 (47%), Positives = 155/254 (61%), Gaps = 5/254 (1%)

Query: 20  RIALGVEYKGARYRGWQRQASGVPSVQQALEQALSKVANEPISVVCAGRTDAGVHGCGQV 79
           R+ALG+ Y G  Y GWQ Q SG  +VQ  LE AL++ A++PI  +CAGRTDAGVH   QV
Sbjct: 2   RLALGIRYNGQAYEGWQSQRSG-RTVQDKLEAALARFADQPIGTLCAGRTDAGVHALMQV 60

Query: 80  VHFDTRAVRDERAWTMGTNFNLPHDISVVWSRPMPADFHARFKACARRYRYVIYNDPIRP 139
           VHFDT   R+  +W  GTN  LP DI+V W+ P+P +FH R  A ARRY YV+   P+RP
Sbjct: 61  VHFDTGVEREPFSWMRGTNRYLPDDIAVQWAHPVPGEFHCRASALARRYLYVLSQSPVRP 120

Query: 140 AHLAEEVTWNHRPLDVDRMAEAAQYLLGTHDFSAFRASQCQAKSPIKHIYHLRVTRHGQ- 198
           +  +  V W+   LD D M  AA  L+G HDFS+FRAS CQA+SP+K +  + +TR G  
Sbjct: 121 SLDSGRVGWSMHALDGDAMRAAAALLVGQHDFSSFRASACQARSPVKDLRRIEITRVGAG 180

Query: 199 ---MIVLDVRATAFLHHMVRNIAGVLMAIGAGERPVAWAREVLEGRNRREGGVTAHPYGL 255
                  +  A AFLHHM+RN+ G L+ IG G+    W  EVLE R+R+    T    GL
Sbjct: 181 DRCRWHFEFEADAFLHHMIRNLMGCLVRIGRGDERPEWIAEVLEARSRKVAAPTFSASGL 240

Query: 256 YLVQVEYPEAFALP 269
           Y +   Y   + LP
Sbjct: 241 YFLGPLYDAKWGLP 254