Pairwise Alignments

Query, 286 a.a., tRNA pseudouridine (38-40)synthase from Pseudomonas putida KT2440

Subject, 269 a.a., tRNA pseudouridine(38-40) synthase TruA from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  117 bits (294), Expect = 2e-31
 Identities = 86/259 (33%), Positives = 124/259 (47%), Gaps = 20/259 (7%)

Query: 25  VEYKGARYRGWQRQASGVPSVQQALEQALSKVANEPISVVCAGRTDAGVHGCGQVVHFDT 84
           + Y+GA Y+GWQR   G+  VQQ LE++L K+   P+++V  GRTDAGVH      H D 
Sbjct: 7   IGYQGANYKGWQRHPYGI-GVQQVLEESLGKILKAPVAIVGCGRTDAGVHASQFFFHLD- 64

Query: 85  RAVRDERAWTMGTNFN--LPHDISVVWSRPMPADFHARFKACARRYRYVI--YNDPIRPA 140
             V +  A+ M    N  LP DI+V    PM    HARF A  R Y Y I  Y DP   +
Sbjct: 65  --VAEPWAFDMLFRLNKVLPPDIAVFDILPMEGLPHARFDATQRNYDYFIHTYKDPFL-S 121

Query: 141 HLAEEVTWNHRPLDVDRMAEAAQYLLGTHDFSAFRASQCQAKSPIKHIYHLR--VTRHGQ 198
           H +     N+  L+++ M  A   L    D+ +   +  + +S I H+   R      G 
Sbjct: 122 HTSSLYLVNN--LNLEAMKAATALLPRYSDYRSLCLAPAEHESTICHVTAARWLTDSRGD 179

Query: 199 MIVLDVRATAFLHHMVRNIAGVLMAIGAGERPVAWAREVLEGRNRREGGVTAHPYGLYLV 258
            +   + A  +L  M+R + G L+ +G+G   +      L   N  +    AHP GLYL 
Sbjct: 180 RLRFQIAANRYLSRMIRILVGQLLKVGSGTLSLGEFESYLSTENAPKHLSPAHPQGLYLS 239

Query: 259 QVEYP-------EAFALPK 270
           +V YP        AF+ P+
Sbjct: 240 KVSYPYLDLPPRSAFSAPR 258