Pairwise Alignments

Query, 286 a.a., tRNA pseudouridine (38-40)synthase from Pseudomonas putida KT2440

Subject, 266 a.a., tRNA pseudouridine synthase I from Agrobacterium fabrum C58

 Score =  175 bits (443), Expect = 1e-48
 Identities = 105/257 (40%), Positives = 141/257 (54%), Gaps = 9/257 (3%)

Query: 20  RIALGVEYKGARYRGWQRQASGVPSVQQALEQALSKVANEPISVVCAGRTDAGVHGCGQV 79
           R  + VEY G  Y GWQRQ +G PSVQ ALE A+  +  E +S+  AGRTD+GVH  GQV
Sbjct: 3   RFRMTVEYDGTPYYGWQRQENG-PSVQGALEAAVRSLTGESVSIRGAGRTDSGVHAVGQV 61

Query: 80  VHFDTRAVRDERAWTMGTNFNLP-----HDISVVWSRPMPADFHARFKACARRYRYVIYN 134
            H D    RD   + +    N         ++V+ +  +  DF ARF A  R Y Y I  
Sbjct: 62  AHIDLS--RDWEPYKLRNALNAHLAMAGEAVAVLDAAAVTEDFDARFSALRRHYLYRIIC 119

Query: 135 DPIRPAHLAEEVTWNHRPLDVDRMAEAAQYLLGTHDFSAFRASQCQAKSPIKHIYHLRVT 194
              R A   +   W  + LD +RM EAAQ L+G HDF+ FR+  CQA SP++ +  L VT
Sbjct: 120 RKSRLALEHKRAWWVSKDLDHERMHEAAQMLVGRHDFTTFRSVHCQANSPVRTLDRLDVT 179

Query: 195 RHGQMIVLDVRATAFLHHMVRNIAGVLMAIGAGERPVAWAREVLEGRNRREGGVTAHPYG 254
           R+G +I +   A +FLH+ +R+ AG L   G G       R  LE R+R+  G  A P G
Sbjct: 180 RNGDLIEIRATAQSFLHNQIRSFAGTLKLAGEGGMTPDDVRAALEARDRKACGPVAPPDG 239

Query: 255 LYLVQVEYPEAFALPKR 271
           LY +QV+YP+    P+R
Sbjct: 240 LYFMQVDYPDVIP-PRR 255