Pairwise Alignments

Query, 1098 a.a., PAS/PAC/GAF sensor-containing diguanylate cyclase/phosphodiesterase from Pseudomonas putida KT2440

Subject, 1059 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Variovorax sp. SCN45

 Score =  382 bits (980), Expect = e-109
 Identities = 242/706 (34%), Positives = 372/706 (52%), Gaps = 27/706 (3%)

Query: 394  LLDITDQVEREQRLSASE---EKFASLFQVSPDPICVTRQDTGQFIEINPAFTQTFGWSS 450
            L  +  Q + +Q L+AS    E    L    P P+ VT   T + +  NP+     G   
Sbjct: 368  LAQLDRQRQAQQELAASARAAEAQRDLVAAIPIPLMVTAIPTHEVLNANPSAQAWLG--- 424

Query: 451  AQVLGRTAEEIGLWAESVERAKRIEQVIREQALSNVAVVLNHRNGDPLTCVISSRLITVD 510
                G T +   L      R++  +Q+    A+    V       +P   V+S+R +   
Sbjct: 425  ----GGTRDPWALGVAPGVRSRFFQQLADRGAVDEFEVRWLG-GAEPSWAVLSARRLVYQ 479

Query: 511  DQPCSVTTLRDITQQQRAEAALKSSEEKFAKAFHSSPDAITITERHSGRYLEVNDGFCRL 570
             Q   +T    I   +  E  L      +AK F +S + I I      R L  N   CRL
Sbjct: 480  GQDALLTAFTPINHLKLMEQRLML----WAKVFEASSEGILIINGEH-RILTANRALCRL 534

Query: 571  TGYSTDEVIGHTVYEIGIWADDKQRSALLAELRERGRVHHREMLGRNKRGDILT--VEVS 628
            TG+   +++G    ++   +D     A L  + ++      E+  R + GD     +  S
Sbjct: 535  TGHDLGDLVGEPPEQL--MSDGSLHFADLWPVLDQRGTWQGEVTVRRRNGDSYPAWLVAS 592

Query: 629  VEPITLNEVDCLLLTARDVSQLKNAQAQIRHLAYHDPLTNLPNRALLMDRLSQQIALLKR 688
            V       +   + T+ DVS  K ++A+IR LA+HD LT LPNR+L ++RL   +   +R
Sbjct: 593  VVRDGPERISHYIFTSIDVSDRKRSEARIRFLAHHDVLTELPNRSLCIERLGLALQQAQR 652

Query: 689  HNLRGALLFLDLDHFKHINDSLGHPVGDTVLKIITARLEASVRLEDTVARLGGDEFVVLL 748
               R  +LF+DLD FK+INDSLGH VGD +L+ + AR+  +VR  DTV+RLGGDEFVV+L
Sbjct: 653  KGQRVGVLFIDLDRFKNINDSLGHHVGDALLRSVAARMSQAVRPGDTVSRLGGDEFVVVL 712

Query: 749  SGLEGSREHVEEKVRELADTLRELLAEPMSLDGQRLQVTPSIGVALIPDHGTTPADLLKR 808
            + +   +E +    R L   +R+    P  +DG  + V+ S+G+A+ PD       L++ 
Sbjct: 713  NNVADGQEILSLVERRLISLIRQ----PHDIDGAEIHVSCSVGIAVYPDDAQDIDALMRH 768

Query: 809  ADIALYRAKDSGRNTTQLFHTTMQKAASERLRMENDLRLALARGELALHFQPQVDARDNR 868
            AD+A+Y++K SGR+T + F   M + A +RL++E+ LR A+ R EL+LH+QP++DA    
Sbjct: 769  ADVAMYQSKASGRDTARFFTPEMNERAQQRLQLESSLRHAIERDELSLHYQPRIDAHSGE 828

Query: 869  IVGAEVLLRWHHPQLGQQPPSQFIQVLEESGLILEVGSWILDEACDACARMLTDGLIDAD 928
            ++  E LLRW   +LGQ  P+QFI + EESG I+ +G+W++++AC   A    DGL    
Sbjct: 829  LICVEALLRWQSAELGQVRPAQFIPIAEESGQIVAIGAWVIEQACAQHAAWRRDGL---G 885

Query: 929  DFNLCVNISPRQFRQNDFVGRVLRSLDDYRLPRQMLTLEITEGIVIQNLEDTISKMCELK 988
               + +N+S  Q R    +  +  ++  Y +    L +E+TE  ++   E ++ ++  LK
Sbjct: 886  AIRVAINMSALQLRDGGLLEVLRGAIALYGVSPGDLEIELTESTLMDAAEQSLVQLHALK 945

Query: 989  RYGVSFAMDDFGTGYSSLTYLKRLPVDALKIDQSFVRDAPVDPNDAEIVRAIVAMARSLD 1048
              GV  ++DDFGTGYSSL YL R P+D LKID+SF+     DP D  I RAI+ +  +L 
Sbjct: 946  SLGVMLSIDDFGTGYSSLNYLNRFPIDKLKIDRSFIHKMLGDPTDMAIARAIIGLGHTLG 1005

Query: 1049 LAVIAEGVELTEQLAFLERLGCHLYQGYLHSRPLPLPEFRQMLLEA 1094
            L V+AEGVE  E+   L    C   QGYL SRP+P  +    + +A
Sbjct: 1006 LRVVAEGVERREEADTLRAARCDELQGYLISRPMPAGKLAGWIAQA 1051