Pairwise Alignments

Query, 1098 a.a., PAS/PAC/GAF sensor-containing diguanylate cyclase/phosphodiesterase from Pseudomonas putida KT2440

Subject, 733 a.a., Sensory box protein/GGDEF domain protein from Pseudomonas putida KT2440

 Score =  354 bits (909), Expect = e-101
 Identities = 212/582 (36%), Positives = 321/582 (55%), Gaps = 12/582 (2%)

Query: 514  CSVTTLRDITQQQRAEAALKSSEEKFAKAFHSSPDAITITERHSGRYLEVNDGFCRLTGY 573
            C+        + +R    L+ SE++F   F  +P+ +   +R +G    VN    +L   
Sbjct: 162  CAAQLAAIAIRHERDGQRLEESEQRFRSLFTYNPNPVFALDR-AGNIQSVNPAGLKLKAG 220

Query: 574  STDEVIGHTVYEIGIWADDKQRSALLAELRERGRVHHREMLGRNKRGDI-LTVEVSVEPI 632
            +  +++GH    + ++ +D  +          G     E   R++  D  L ++++  PI
Sbjct: 221  AATDLVGHHFSHL-VFEEDLPKVNQHFFAARAGEPQRFEARVRDESDDKQLIMDIANLPI 279

Query: 633  TLN-EVDCLLLTARDVSQLKNAQAQIRHLAYHDPLTNLPNRALLMDRLSQQIALLKRHNL 691
             +N E+  +   ARD+S+ K+ + Q+   A HD LT L NR  L DRL Q     ++  +
Sbjct: 280  MVNGEIVGVFGIARDISKQKHYERQLSINASHDGLTGLLNRLSLEDRLVQACRSSRQRKV 339

Query: 692  RGALLFLDLDHFKHINDSLGHPVGDTVLKIITARLEASVRLEDTVARLGGDEFVVLLSGL 751
            + A++++DLD FK INDS+GH  GD VL  +  RL   VR  DTV R+GGDEFVVLL+ L
Sbjct: 340  QLAVMYIDLDGFKSINDSIGHYFGDQVLIEVAQRLTQQVRPADTVVRMGGDEFVVLLTDL 399

Query: 752  EGSREHVEEKVRELADTLRELLAEPMSLDGQRLQVTPSIGVALIPDHGTTPADLLKRADI 811
                + V    R LA      + +P  + G  L V+ SIG+ +   H   P  L+++AD+
Sbjct: 400  LRDEDAVPVAERLLAS-----IGKPYCIQGIDLHVSTSIGITVSDGHIEQPMKLIQQADM 454

Query: 812  ALYRAKDSGRNTTQLFHTTMQKAASERLRMENDLRLALARGELALHFQPQVDARDNRIVG 871
            A+Y+AK  GRN  Q + + +     E   + NDL+ A+     +LH+QPQ++AR  R+VG
Sbjct: 455  AMYKAKQQGRNNFQWYTSDLNHRVCEHRSLRNDLQKAIKTQSFSLHYQPQIEARTRRVVG 514

Query: 872  AEVLLRWHHPQLGQQPPSQFIQVLEESGLILEVGSWILDEACDACARMLTDGLIDADDFN 931
             E LLRW HP  G   P+ FI V E+SG I+ +  W+LD AC     +   G    +  +
Sbjct: 515  IEALLRWEHPVRGFISPAVFIPVAEDSGQIIPLSLWVLDTACAQLRDLCDQGF---NGIS 571

Query: 932  LCVNISPRQFRQNDFVGRVLRSLDDYRLPRQMLTLEITEGIVIQNLEDTISKMCELKRYG 991
            + VNISP  F+   FV  +   L  + L    L LEITE +++ N+E  I+ +  LK  G
Sbjct: 572  MAVNISPMHFQCGQFVECIQAVLSKHGLSAGQLELEITESLLLHNVEQAIATLHRLKDLG 631

Query: 992  VSFAMDDFGTGYSSLTYLKRLPVDALKIDQSFVRDAPVDPNDAEIVRAIVAMARSLDLAV 1051
            V  A+DDFGTG+SSL+YLK LP+D +KID+SF++D   +P+DA I + I++MA  L L+V
Sbjct: 632  VRIALDDFGTGFSSLSYLKCLPIDKIKIDRSFIQDISTNPHDAAITQGIISMAHHLSLSV 691

Query: 1052 IAEGVELTEQLAFLERLGCHLYQGYLHSRPLPLPEFRQMLLE 1093
            +AEGVE   Q+ FLER  C + QGY  +RP+     R  L +
Sbjct: 692  VAEGVETAPQVNFLERGRCDILQGYYFARPMSHEALRTFLAD 733



 Score = 33.9 bits (76), Expect = 5e-05
 Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 9/85 (10%)

Query: 379 LYRDDQGIP-------LRMAGTLLDITDQVERE-QRLSASEEKFASLFQVSPDPICVTRQ 430
           LY+D    P       L  A  L  I  + ER+ QRL  SE++F SLF  +P+P+    +
Sbjct: 144 LYQDQAIAPSEVQIHRLTCAAQLAAIAIRHERDGQRLEESEQRFRSLFTYNPNPVFALDR 203

Query: 431 DTGQFIEINPAFTQTFGWSSAQVLG 455
             G    +NPA  +    ++  ++G
Sbjct: 204 -AGNIQSVNPAGLKLKAGAATDLVG 227