Pairwise Alignments

Query, 1098 a.a., PAS/PAC/GAF sensor-containing diguanylate cyclase/phosphodiesterase from Pseudomonas putida KT2440

Subject, 833 a.a., bifunctional diguanylate cyclase/phosphodiesterase from Magnetospirillum magneticum AMB-1

 Score =  380 bits (975), Expect = e-109
 Identities = 252/680 (37%), Positives = 357/680 (52%), Gaps = 41/680 (6%)

Query: 427  VTRQDTGQFIEINPAFTQTFGWSSAQVLGRTAEEIGLWAESVERAKRIEQVIREQAL--- 483
            VT  + G     NP+  + FG++  +++G+    +            I ++I+       
Sbjct: 172  VTFGEDGGIGTYNPSAERIFGYAPPEIVGKQISLL------------IPELIKPDPFLDH 219

Query: 484  -SNVAVVLNHRNGDPLTCVISSRLITVDDQPCSVTTLRDITQQQRAEAALKSSEEKFAKA 542
             + V  V   R   PL   ++S  + +  Q   V    DIT ++  EA L + +E     
Sbjct: 220  RTEVVGVRKTRAHFPLELSLAS--MELGGQRLYVAIGHDITLRKANEAELVNQKEWLTTL 277

Query: 543  FHSSPDAITITERHSGRYLEVNDGFCRLTGYSTDEVIGHTVYEIGIWADDKQRSALLA-E 601
             ++ PD I   +   GR+L  N  +  L G S  + +G T  E+   + + Q     A E
Sbjct: 278  INALPDLICFKDG-KGRWLVANQFYLDLVGLSGVDYVGRTGPELARLSHNFQEFLTTAKE 336

Query: 602  LRERG-----RVHHREMLGRNKRGDILTVEVSVEPITLNEVDC----LLLTARDVSQLKN 652
              ER       + + + +    RG   T    +  I L + D     L+L  RDV++ K 
Sbjct: 337  TDERAWKDGKPLSYEKAMETPSRG---TKVFDMLKIPLFKPDGRRSGLVLVGRDVTERKL 393

Query: 653  AQAQIRHLAYHDPLTNLPNRALLMDRLSQQIALLKRHNLRGALLFLDLDHFKHINDSLGH 712
            A A+I+HLA+HD LT LPNR L  +RL Q +A  KR   + AL+FLDLD FK IND+LGH
Sbjct: 394  AAARIQHLAHHDALTELPNRVLFQERLRQSLAQAKRSGWKLALMFLDLDKFKDINDTLGH 453

Query: 713  PVGDTVLKIITARLEASVRLEDTVARLGGDEFVVLLSGLEGSREHVEEKVRELADTLREL 772
             VGD +L+ +  RL   VR  DTVARLGGDEF V+L+ L+       E    +A+++   
Sbjct: 454  HVGDLLLRAVAKRLTRCVRETDTVARLGGDEFAVILTNLDDL-----EGASRVAESIIAG 508

Query: 773  LAEPMSLDGQRLQVTPSIGVALIPDHGTTPADLLKRADIALYRAKDSGRNTTQLFHTTMQ 832
            +A+P  LD   ++ + SIG+ L PD       LLK AD+A++R+K  GRN    +   M 
Sbjct: 509  IADPFGLDEHEVRTSTSIGITLYPDDSIDADQLLKNADLAMFRSKAEGRNNYHFYVAQMD 568

Query: 833  KAASERLRMENDLRLALARGELALHFQPQVDARDNRIVGAEVLLRWHHPQLGQQPPSQFI 892
                 R  +ENDLR AL   +L LH+QP V+    RIVG E LLRW+HP  G  PP +FI
Sbjct: 569  AEVRARKLIENDLRQALGTEQLELHYQPLVEMSSRRIVGCEALLRWNHPTRGWVPPGEFI 628

Query: 893  QVLEESGLILEVGSWILDEACDACARMLTDGLIDADDFNLCVNISPRQFRQ-NDFVGRVL 951
             ++E S LI  +G WIL  AC        DGL   +   + VN+SP QF+Q    +  V 
Sbjct: 629  PIIERSDLIGPLGRWILHRACQQGREWQRDGL---EPMKIAVNLSPAQFKQTQSIIAMVA 685

Query: 952  RSLDDYRLPRQMLTLEITEGIVIQNLEDTISKMCELKRYGVSFAMDDFGTGYSSLTYLKR 1011
              LD        L LEITEGI +QN++ TI  +  L+  GV  ++DDFGTGYSSL YLKR
Sbjct: 686  DILDQTGFAPDQLQLEITEGIAMQNVDATIEVLQSLRAMGVVISIDDFGTGYSSLNYLKR 745

Query: 1012 LPVDALKIDQSFVRDAPVDPNDAEIVRAIVAMARSLDLAVIAEGVELTEQLAFLERLGCH 1071
             PVD LKID+SFV D  + P++A +V AIV +  SL   V  EG+E  EQL FL+     
Sbjct: 746  FPVDKLKIDRSFVVDIGLHPDNAAVVEAIVNLGHSLRTRVNVEGIETKEQLDFLQAHKVD 805

Query: 1072 LYQGYLHSRPLPLPEFRQML 1091
              QG+  S+ +P  +F  ++
Sbjct: 806  EAQGFYFSKAVPADQFAHLV 825



 Score = 34.7 bits (78), Expect = 3e-05
 Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 1/76 (1%)

Query: 132 GRPQMIGVIREITRQRERETALINSEKRFATLFHLSPNAILLTRRRDGMIFEVNQHFEDM 191
           G+   + +  +IT ++  E  L+N ++   TL +  P+ I     + G     NQ + D+
Sbjct: 246 GQRLYVAIGHDITLRKANEAELVNQKEWLTTLINALPDLICFKDGK-GRWLVANQFYLDL 304

Query: 192 FGWPGSQVIGKTSLEL 207
            G  G   +G+T  EL
Sbjct: 305 VGLSGVDYVGRTGPEL 320



 Score = 31.6 bits (70), Expect = 3e-04
 Identities = 31/145 (21%), Positives = 59/145 (40%), Gaps = 8/145 (5%)

Query: 396 DITDQVEREQRLSASEEKFASLFQVSPDPICVTRQDTGQFIEINPAFTQTFGWSSAQVLG 455
           DIT +   E  L   +E   +L    PD IC  +   G+++  N  +    G S    +G
Sbjct: 256 DITLRKANEAELVNQKEWLTTLINALPDLICF-KDGKGRWLVANQFYLDLVGLSGVDYVG 314

Query: 456 RTAEEIGLWAESVERAKRIEQVIREQA------LSNVAVVLNHRNGDPLTCVISSRLITV 509
           RT  E+   + + +      +   E+A      LS    +     G  +  ++   L   
Sbjct: 315 RTGPELARLSHNFQEFLTTAKETDERAWKDGKPLSYEKAMETPSRGTKVFDMLKIPLFKP 374

Query: 510 DDQPCSVTTL-RDITQQQRAEAALK 533
           D +   +  + RD+T+++ A A ++
Sbjct: 375 DGRRSGLVLVGRDVTERKLAAARIQ 399