Pairwise Alignments

Query, 1098 a.a., PAS/PAC/GAF sensor-containing diguanylate cyclase/phosphodiesterase from Pseudomonas putida KT2440

Subject, 802 a.a., bifunctional diguanylate cyclase/phosphodiesterase from Magnetospirillum magneticum AMB-1

 Score =  381 bits (979), Expect = e-109
 Identities = 245/707 (34%), Positives = 372/707 (52%), Gaps = 31/707 (4%)

Query: 394  LLDITDQVEREQRLSASEEKFASLFQVSPDPICVTRQDTGQFIEINPAFTQTFGWSSAQV 453
            L D++ + + EQ +   +    ++   S D I +   + G  + +N A +  F  +S  +
Sbjct: 113  LYDVSKRKQAEQAILDGKTLIRAMLDSSTDGIVLVNAE-GTILAVNAAASAIFEKNSDDL 171

Query: 454  LGRTAEEIGLW---AESVERAKR--IEQVIREQALSNVAVVLNHRNGDPLTCVISSRLIT 508
             G+      +W    +SV    R  I++V+  +      V  +H  G  L  V    +  
Sbjct: 172  PGKA-----IWDHLPDSVVAPMRRGIDRVLDRRE----TVESHHAIGAKLFDVHMHLVAD 222

Query: 509  VDDQPCSVTTL-RDITQQQRAEAALKSSEEKFAKAFHSSPDAITITERHSGRYLEVNDGF 567
               Q   V    RD+TQ  +    L+    K   A   +P ++ IT+ H G    VN  F
Sbjct: 223  SVGQRDRVAIFSRDVTQSHQRRQQLR----KLETALEQAPVSVMITDSH-GAIEYVNRAF 277

Query: 568  CRLTGYSTDEVIGHTVYEIGIWADDKQRSALLAELRERGRVHHREMLGRNKRGDILTVEV 627
              ++GYS DEV+G     +            +      G     E+  R K G +     
Sbjct: 278  VLVSGYSEDEVLGRNPRLLKSGETVASLYRDMWHCLASGATWQGELCNRAKDGSLFWEYA 337

Query: 628  SVEPITLNE--VDCLLLTARDVSQLKNAQAQIRHLAYHDPLTNLPNRALLMDRLSQQIAL 685
            ++ PI  ++  V   +    +++Q K  + Q+ H A HD LT LPNR LL DR+   I +
Sbjct: 338  TISPIRDDDGVVTHFMAVKENITQRKETEQQLVHQATHDTLTGLPNRLLLEDRVHHAIEV 397

Query: 686  LKRHNLRGALLFLDLDHFKHINDSLGHPVGDTVLKIITARLEASVRLEDTVARLGGDEFV 745
             KR   R  L+FLDLD FK +NDSLGH  GD +LK+++ RL  ++R  DTVARLGGDEFV
Sbjct: 398  AKREGRRIGLMFLDLDRFKIVNDSLGHVAGDELLKVVSDRLRHTLRRSDTVARLGGDEFV 457

Query: 746  VLLSGLEGSREHVEEKVRELADTLRELLAEPMSLDGQRLQVTPSIGVALIPDHGTTPADL 805
            V+L+  + + E     + E+A+ +   L EP+ L G ++ V  SIG+A+ PD G     L
Sbjct: 458  VVLTHFQSTTE-----LAEVAEKISAALDEPVELSGHKVHVGASIGIAIYPDDGDNFNAL 512

Query: 806  LKRADIALYRAKDSGRNTTQLFHTTMQKAASERLRMENDLRLALARGELALHFQPQVDAR 865
            +K AD A+YRAK  GRNT   + + M   A +RL++E  LR AL RGE  L +QPQVD +
Sbjct: 513  MKDADTAMYRAKQKGRNTFCFYDSNMNDEALDRLKLEEALRRALVRGEFQLFYQPQVDLQ 572

Query: 866  DNRIVGAEVLLRWHHPQLGQQPPSQFIQVLEESGLILEVGSWILDEACDACARMLTDGLI 925
              R  G E L+RW+ P+ GQ  P+ FI V EES LI  +G W+L+E+C   A     GL 
Sbjct: 573  TGRTSGVEALIRWNSPERGQVSPALFIPVAEESNLISMIGWWVLEESCRQIAAWREAGL- 631

Query: 926  DADDFNLCVNISPRQFRQNDFVGRVLRSLDDYRLPRQMLTLEITEGIVIQNLEDTISKMC 985
                  + VN+S RQF  +  V  +   +  Y +    L +E+TE  V+   +  I ++ 
Sbjct: 632  --TGIKVAVNVSGRQFLNHALVECISDLMAQYAVLPSQLEIELTESTVMAEPDRAIEQLT 689

Query: 986  ELKRYGVSFAMDDFGTGYSSLTYLKRLPVDALKIDQSFVRDAPVDPNDAEIVRAIVAMAR 1045
             L+  G+  ++DDFGTGYSSL+YLKRLP+  +K+D+SFVRD     ++A IV AI+ +A 
Sbjct: 690  RLREIGIQVSVDDFGTGYSSLSYLKRLPLSTIKVDRSFVRDVNNQSDNAAIVSAILGLAD 749

Query: 1046 SLDLAVIAEGVELTEQLAFLERLGCHLYQGYLHSRPLPLPEFRQMLL 1092
            +LD++++AEGVE   +   L+  GC   QG+ +++P+P  +    +L
Sbjct: 750  ALDMSIVAEGVETEGEEQHLKDAGCIKVQGFRYAKPMPADQLAAWML 796



 Score = 67.8 bits (164), Expect = 3e-15
 Identities = 72/305 (23%), Positives = 131/305 (42%), Gaps = 31/305 (10%)

Query: 160 FATLFHLSPNAILLTRRRDGMIFEVNQHFEDMFGWPGSQVIGKTSLELGLWVNPEQRHQI 219
           F  +   SP  + ++RRRDG++  VN+ F  + G    Q IG ++     + + +QR ++
Sbjct: 10  FLGILDESPVGVSVSRRRDGLVLFVNRRFCQITGMTPEQCIGHSARRH--FADDDQRLEV 67

Query: 220 VESTRANGGPLIMEVQFRATSGKVHDGILCTQGIELEGVTFLISTFVDTTERKRAEQALK 279
           V   +  G     +V+F    G     +L  +   L G    ++   D ++RK+AEQA+ 
Sbjct: 68  VRQLKEAGEIADADVKFFRVDGSSFWSVLTIRSATLNGEAVNLAWLYDVSKRKQAEQAIL 127

Query: 280 DSQERLDLALDSAQLGTWDWHIPSGMLYGSARAAQLHGLPPIPFHESFD-----AFFEGV 334
           D +  +   LDS+  G    +    +L  +A A+ +       F ++ D     A ++ +
Sbjct: 128 DGKTLIRAMLDSSTDGIVLVNAEGTILAVNAAASAI-------FEKNSDDLPGKAIWDHL 180

Query: 335 PEHERNSMRQAYRSL---REGPAGNYQITYRVQLENGTSRYIESRARLYRDDQGIPLRMA 391
           P+     MR+    +   RE    ++ I          ++  +    L  D  G   R+A
Sbjct: 181 PDSVVAPMRRGIDRVLDRRETVESHHAI---------GAKLFDVHMHLVADSVGQRDRVA 231

Query: 392 GTLLDITDQVEREQRLSASEEKFASLFQVSPDPICVTRQDTGQFIEINPAFTQTFGWSSA 451
               D+T   +R Q+L     K  +  + +P  + +T    G    +N AF    G+S  
Sbjct: 232 IFSRDVTQSHQRRQQL----RKLETALEQAPVSVMIT-DSHGAIEYVNRAFVLVSGYSED 286

Query: 452 QVLGR 456
           +VLGR
Sbjct: 287 EVLGR 291



 Score = 53.1 bits (126), Expect = 8e-11
 Identities = 34/119 (28%), Positives = 57/119 (47%), Gaps = 2/119 (1%)

Query: 539 FAKAFHSSPDAITITERHSGRYLEVNDGFCRLTGYSTDEVIGHTVYEIGIWADDKQRSAL 598
           F      SP  ++++ R  G  L VN  FC++TG + ++ IGH+      +ADD QR  +
Sbjct: 10  FLGILDESPVGVSVSRRRDGLVLFVNRRFCQITGMTPEQCIGHSARR--HFADDDQRLEV 67

Query: 599 LAELRERGRVHHREMLGRNKRGDILTVEVSVEPITLNEVDCLLLTARDVSQLKNAQAQI 657
           + +L+E G +   ++      G      +++   TLN     L    DVS+ K A+  I
Sbjct: 68  VRQLKEAGEIADADVKFFRVDGSSFWSVLTIRSATLNGEAVNLAWLYDVSKRKQAEQAI 126