Pairwise Alignments
Query, 1098 a.a., PAS/PAC/GAF sensor-containing diguanylate cyclase/phosphodiesterase from Pseudomonas putida KT2440
Subject, 830 a.a., two-component system response regulator from Magnetospirillum magneticum AMB-1
Score = 385 bits (988), Expect = e-111
Identities = 242/693 (34%), Positives = 369/693 (53%), Gaps = 24/693 (3%)
Query: 407 LSASEEKFASLFQVSPDPICVTRQDTGQFIEINPAFTQTFGWSSAQVLGRTAEEIGLWAE 466
L SE +F +LF + + ++ G +I NPAF G+S A++ T +I + E
Sbjct: 139 LRTSESRFRALFDNAGTGVILS-DAAGAYIHCNPAFCTMVGYSDAELQKMTYRDI-TYPE 196
Query: 467 SVERAKRIEQVIREQALSNVAVVLNH--RNGDPLTC---VISSRLITVDDQPCSVTTLRD 521
+ ++ + + + + R+G+ L V + R + ++ +V + D
Sbjct: 197 DMNAHTQMRDDMMAGRTDSYELTKRYIRRDGNILWARLTVTAMREGSDNELRFTVAVVED 256
Query: 522 ITQQQRAEAALKSSEEKFAKAFHSSPDAITITERHSGRYLEVNDGFCRLTGYSTDEVIGH 581
+T+++R E ++ + A F S+ + + +T+ + + VN F LTGY DEVIG
Sbjct: 257 VTEKKRLEDHMRLA----ATVFESTGEGLFVTDEKR-QIIHVNPAFTELTGYPADEVIGR 311
Query: 582 TVYEIGIWADDKQ-RSALLAELRERGRVHHREMLGRNKRGDILT--VEVSVEPITLNEVD 638
T + + A+ L E G+ E+ R K G++ + +SV E+
Sbjct: 312 TPKFLASGRHTPEFYDAVFKTLAECGK-WQGEIWNRRKTGEMFAEWLNISVVRNERGELT 370
Query: 639 CLLLTARDVSQLKNAQAQIRHLAYHDPLTNLPNRALLMDRLSQQIALLKRHNLRGALLFL 698
+ D++ K + ++ + A HDPLT LPNR L +RL++ + R+ ALLF+
Sbjct: 371 NYVAVFSDITSRKQDEERLNYQANHDPLTRLPNRTLFQERLTRALTRAHRNQAIVALLFI 430
Query: 699 DLDHFKHINDSLGHPVGDTVLKIITARLEASVRLEDTVARLGGDEFVVLLSGLEGSREHV 758
DLD FK +ND+LGH GD +L+ + RL + VR DTVARL GDEF V+L + R+
Sbjct: 431 DLDFFKQVNDTLGHLAGDILLQQVAERLTSCVRQGDTVARLAGDEFTVILEEISEPRDGA 490
Query: 759 EEKVRELADTLRELLAEPMSLDGQRLQVTPSIGVALIPDHGTTPADLLKRADIALYRAKD 818
+A + LLAEP L G +++ SIGVAL P G L+K AD A+YRAK
Sbjct: 491 V-----VAHKILSLLAEPFDLQGHEARISSSIGVALYPSDGGDAQTLIKLADAAMYRAKH 545
Query: 819 SGRNTTQLFHTTMQKAASERLRMENDLRLALARGELALHFQPQVDARDNRIVGAEVLLRW 878
GRN + ++ A ERL +E+ LR A+ R E LH+QP DAR +V E LLRW
Sbjct: 546 QGRNACRFHSESINAQAFERLALESALRHAVERREFLLHYQPIFDARSGSVVAVEALLRW 605
Query: 879 HHPQLGQQPPSQFIQVLEESGLILEVGSWILDEACDACARMLTDGLIDADDFNLCVNISP 938
HP G P+QF+ + EE+GLI+ VG ++LDEAC L G + +N+S
Sbjct: 606 RHPDFGMIMPNQFLPLAEETGLIMPVGKFVLDEACRQAKAWLDAG---HTGLKVGINLSS 662
Query: 939 RQFRQNDFVGRVLRSLDDYRLPRQMLTLEITEGIVIQNLEDTISKMCELKRYGVSFAMDD 998
RQ R + + + +L+ LP L L++ E +I +D + + K GV A+D
Sbjct: 663 RQLRAPELIEDIAAALEGSGLPPSALELDVPESAIIDKGQDVDAIFTQFKTLGVRMAIDA 722
Query: 999 FGTGYSSLTYLKRLPVDALKIDQSFVRDAPVDPNDAEIVRAIVAMARSLDLAVIAEGVEL 1058
FG+GYSS +L++LP + LKIDQ FVRDA ++EIV AIVA+AR L L+V+A G+E
Sbjct: 723 FGSGYSSFAFLRKLPSNTLKIDQGFVRDAASGAEESEIVTAIVAVARGLHLSVVAPGIET 782
Query: 1059 TEQLAFLERLGCHLYQGYLHSRPLPLPEFRQML 1091
EQLA L + C + QG+L + P+P E + L
Sbjct: 783 EEQLAHLVKYDCDMVQGFLFAHPMPAEELTEFL 815
Score = 45.8 bits (107), Expect = 1e-08
Identities = 34/136 (25%), Positives = 66/136 (48%), Gaps = 7/136 (5%)
Query: 528 AEAALKSSEEKFAKAFHSSPDAITITERHSGRYLEVNDGFCRLTGYSTDEVIGHTVYEIG 587
A+AAL++SE +F F ++ + +++ +G Y+ N FC + GYS E+ T +I
Sbjct: 135 ADAALRTSESRFRALFDNAGTGVILSDA-AGAYIHCNPAFCTMVGYSDAELQKMTYRDI- 192
Query: 588 IWADDKQRSALLAELRERGRVHHREMLGR--NKRGDILTVEVSVEPI---TLNEVDCLLL 642
+ +D + + GR E+ R + G+IL ++V + + NE+ +
Sbjct: 193 TYPEDMNAHTQMRDDMMAGRTDSYELTKRYIRRDGNILWARLTVTAMREGSDNELRFTVA 252
Query: 643 TARDVSQLKNAQAQIR 658
DV++ K + +R
Sbjct: 253 VVEDVTEKKRLEDHMR 268
Score = 45.4 bits (106), Expect = 2e-08
Identities = 45/206 (21%), Positives = 86/206 (41%), Gaps = 9/206 (4%)
Query: 77 YLDLLPEEDRARTRQVFQAVVNGEPVEQAMRHRIRWPDGSLHWLEINGSLTHDPHGRPQM 136
Y D+ ED Q+ ++ G + R DG++ W + + +
Sbjct: 189 YRDITYPEDMNAHTQMRDDMMAGRTDSYELTKRYIRRDGNILWARLTVTAMREGSDNELR 248
Query: 137 --IGVIREITRQRERETALINSEKRFATLFHLSPNAILLTRRRDGMIFEVNQHFEDMFGW 194
+ V+ ++T ++ E + + AT+F + + +T + I VN F ++ G+
Sbjct: 249 FTVAVVEDVTEKKRLEDHM----RLAATVFESTGEGLFVTDEKR-QIIHVNPAFTELTGY 303
Query: 195 PGSQVIGKTSLELGLWVNPEQRHQIVESTRANGGPLIMEVQFRATSGKVHDGILCTQGIE 254
P +VIG+T L + + + V T A G E+ R +G++ L +
Sbjct: 304 PADEVIGRTPKFLASGRHTPEFYDAVFKTLAECGKWQGEIWNRRKTGEMFAEWLNISVVR 363
Query: 255 LE--GVTFLISTFVDTTERKRAEQAL 278
E +T ++ F D T RK+ E+ L
Sbjct: 364 NERGELTNYVAVFSDITSRKQDEERL 389