Pairwise Alignments

Query, 323 a.a., tRNA-dihydrouridine synthase C from Pseudomonas putida KT2440

Subject, 315 a.a., tRNA-dihydrouridine synthase C (NCBI) from Escherichia coli BW25113

 Score =  256 bits (653), Expect = 7e-73
 Identities = 134/318 (42%), Positives = 204/318 (64%), Gaps = 9/318 (2%)

Query: 1   MQIALAPMEGLVDNILRDVLTRVGGIDWCVTEFIRVCDRLLPASSFDKLAPELRQGARTA 60
           M++ LAPMEG++D+++R++LT V   D C+TEF+RV D+LLP   F ++ PEL+  +RT 
Sbjct: 1   MRVLLAPMEGVLDSLVRELLTEVNDYDLCITEFVRVVDQLLPVKVFHRICPELQNASRTP 60

Query: 61  AGVPMRVQLLGSDPVCLAENAALACELGAPVIDLNFGCPAKTVNKSRGGAVLLKEPELLH 120
           +G  +RVQLLG  P  LAENAA A ELG+  +DLN GCP+KTVN S GGA LLK+PEL++
Sbjct: 61  SGTLVRVQLLGQFPQWLAENAARAVELGSWGVDLNCGCPSKTVNGSGGGATLLKDPELIY 120

Query: 121 AIVREVRRAVPANIPVTSKMRLGFDSPDGALECATALAEGGSAHLVVHARTKVEGYKPP- 179
              + +R AVPA++PV+ K+RLG+DS +   E A A+ + G+  LVVH RTK +GY+   
Sbjct: 121 QGAKAMREAVPAHLPVSVKVRLGWDSGEKKFEIADAVQQAGATELVVHGRTKEQGYRAEH 180

Query: 180 AHWEWVARVQDVVKVPVFANGEIWTVDDWRRCREVSGAEDIMLGRGLVSRPDLGLQIAAA 239
             W+ +  ++  + +PV ANGEIW     ++C  +SG + +M+GRG ++ P+L  ++   
Sbjct: 181 IDWQAIGDIRQRLNIPVIANGEIWDWQSAQQCMAISGCDAVMIGRGALNIPNLS-RVVKY 239

Query: 240 RDGRDYQPMSWHDLLPLLREFWRQAQAKLSPRYAPGRMKQWLAMLTRSYPEAVVLFAELR 299
            + R    M W +++ LL+++ R  +   +  Y   R+KQWL+ L + Y EA  LF  +R
Sbjct: 240 NEPR----MPWPEVVALLQKYTRLEKQGDTGLYHVARIKQWLSYLRKEYDEATELFQHVR 295

Query: 300 ---REDDCARISRLLGVE 314
                 D AR  + + +E
Sbjct: 296 VLNNSPDIARAIQAIDIE 313