Pairwise Alignments

Query, 323 a.a., tRNA-dihydrouridine synthase C from Pseudomonas putida KT2440

Subject, 312 a.a., putative tRNA-dihydrouridine synthase from Alteromonas macleodii MIT1002

 Score =  326 bits (836), Expect = 4e-94
 Identities = 163/317 (51%), Positives = 221/317 (69%), Gaps = 5/317 (1%)

Query: 1   MQIALAPMEGLVDNILRDVLTRVGGIDWCVTEFIRVCDRLLPASSFDKLAPELRQGARTA 60
           M++ LAPMEG+VD+++RD+LTRVGG D CVTEF+RV D+ +P  +F +L PEL  G +T 
Sbjct: 1   MKVMLAPMEGVVDHLMRDMLTRVGGFDQCVTEFVRVVDQKIPKKTFYRLCPELHNGGKTP 60

Query: 61  AGVPMRVQLLGSDPVCLAENAALACELGAPVIDLNFGCPAKTVNKSRGGAVLLKEPELLH 120
           AGVP+RVQLLG  P  LAENA  A ELG+P +DLNFGCPAKTVNKS+GGAVLLKE + L+
Sbjct: 61  AGVPVRVQLLGQHPQWLAENAQTAIELGSPGVDLNFGCPAKTVNKSKGGAVLLKETQTLY 120

Query: 121 AIVREVRRAVPANIPVTSKMRLGFDSPDGALECATALAEGGSAHLVVHARTKVEGYKPPA 180
            IV+ VR AVPA IPV++K+RLGF+    A+E A A+ E G++ LVVHARTK EGYKPPA
Sbjct: 121 DIVKAVRDAVPAEIPVSAKIRLGFEDKSLAIENAIAITEAGASELVVHARTKTEGYKPPA 180

Query: 181 HWEWVARVQDVVKVPVFANGEIWTVDDWRRCREVSGAEDIMLGRGLVSRPDLGLQIAAAR 240
           +W+W+A+++    +P+ ANGEIW  +D +RC+  S   ++M+GRG ++ P+L + I   +
Sbjct: 181 YWDWIAKIKQHTDIPLVANGEIWNAEDAQRCQSQSECTNLMIGRGALAMPNLAMSI---K 237

Query: 241 DGRDYQPMSWHDLLPLLREFWRQAQAKLSPRYAPGRMKQWLAMLTRSYPEAVVLFAELRR 300
           +G    PM W +L  LL ++          +Y P R+KQW   L R YPEA VLF ++RR
Sbjct: 238 EG--VAPMPWSELAALLIQYSGYEIFGDKGKYYPNRIKQWCGYLKRQYPEAEVLFNDIRR 295

Query: 301 EDDCARISRLLGVEAQV 317
                 I  +L  +A +
Sbjct: 296 LTKSQDIVDVLARQADI 312