Pairwise Alignments

Query, 328 a.a., DNA polymerase III subunit delta' from Pseudomonas putida KT2440

Subject, 337 a.a., DNA polymerase III delta prime subunit (EC 2.7.7.7) from Variovorax sp. SCN45

 Score =  127 bits (319), Expect = 4e-34
 Identities = 82/226 (36%), Positives = 113/226 (50%), Gaps = 28/226 (12%)

Query: 6   PWQQALWQQLAGRSRHAHAYLLHGPQGIGKRAMAERLMARLLCQQPQGLD-ACGACKSCL 64
           PW +    +L    +  HA+LL GP GIG+  +A  L +  LC+QP     ACG C SC 
Sbjct: 8   PWLRRPLAELL--RQRGHAWLLQGPSGIGQYELALALASAWLCEQPTAEGTACGHCASCH 65

Query: 65  LLKAGSHPDNFVLEPE-----------------------EADKPIKVDQVRELVAFVVQT 101
            ++  +H D  VL PE                       +A + I+V+ +R+ V F  +T
Sbjct: 66  AIEVRTHADLCVLMPEVAMQELGWPLDEKAQADIDDKKRKASREIRVEAMRDAVGFAQRT 125

Query: 102 AQLGGRKVVLIEPVEAMNVNASNALLKSLEEPSGDTVLLLVTHQPSRLLPTIKSRCQQVA 161
           +  G  KVVL+ P E MN   +NALLK+LEEP GD   +L +    +LLPTI+SRC    
Sbjct: 126 SARGRGKVVLVYPAERMNTITANALLKTLEEPVGDVRFVLASEAAWQLLPTIRSRCLGFT 185

Query: 162 CPQPSLAQSQAWLAGALPDCDEVERDELLTLAAGSPLMAVSLQAQG 207
            P P  A+++AWLA    D    +   LL  A G P  A+ L   G
Sbjct: 186 LPWPETAEAEAWLAA--QDVPAADAAALLRAAGGRPSDALRLARSG 229