Pairwise Alignments

Query, 328 a.a., DNA polymerase III subunit delta' from Pseudomonas putida KT2440

Subject, 341 a.a., DNA polymerase III, delta prime subunit from Agrobacterium fabrum C58

 Score = 91.7 bits (226), Expect = 2e-23
 Identities = 70/207 (33%), Positives = 97/207 (46%), Gaps = 32/207 (15%)

Query: 23  HAYLLHGPQGIGKRAMAERLMARLLCQ-------------QPQGLDACGACKSCLLLKAG 69
           HA L+ GP+GIGK  +A R    +L                PQ L       S  +    
Sbjct: 41  HAILIEGPEGIGKATLAFRFANHVLTHPDPASAPDFLADPDPQSL------VSRQITAGA 94

Query: 70  SHPDNFVLEPEE-----ADKPIKVDQVRELVAFVVQTAQLGGRKVVLIEPVEAMNVNASN 124
           SH    +  P +         I VD+VR    F  QT+  G  ++V+I+P + +N NA+N
Sbjct: 95  SHNLLHLTRPVDEKTGRVKSAITVDEVRRAGHFFSQTSGTGNWRIVIIDPADDLNRNAAN 154

Query: 125 ALLKSLEEPSGDTVLLLVTHQPSRLLPTIKSRCQQVACPQPSLAQSQAWLAGALPDCD-- 182
           A+LK LEEP    + L+++H P +LLPTI+SRC     P   L  S A +  AL   D  
Sbjct: 155 AILKILEEPPKRAMFLVLSHAPGKLLPTIRSRCM----PLRLLPLSDAAMVQALDQLDIS 210

Query: 183 --EVERDELLTLAAGSPLMAVSLQAQG 207
               +RD LLT + GS   A+ L   G
Sbjct: 211 PEGEKRDALLTASKGSVAQALKLMNYG 237