Pairwise Alignments

Query, 320 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 303 a.a., PCP degradation transcriptional activation protein from Xanthobacter sp. DMC5

 Score =  144 bits (364), Expect = 2e-39
 Identities = 95/297 (31%), Positives = 152/297 (51%), Gaps = 4/297 (1%)

Query: 1   MDIRRLDLNLLLLLDELYREQNLSAAARRLGMSQPMASASLRRLREYFEDQLFLSTGRGM 60
           MD  RLDLNLL+ L+ L  E+N++ AA RL +SQP  SA L RLR+ F+D L +   RGM
Sbjct: 1   MDTSRLDLNLLVTLEALLAERNVTRAAARLHLSQPAVSAQLARLRDLFDDPLLVPARRGM 60

Query: 61  RPTPFTVSIAASVSGVLERIKHEILAKPAFQPRQSDRLFTISTSDIGALIFVPPILRRLG 120
            PT   V +A  +   L++++  + A+  F P  +D   TI+ SD      V P++  L 
Sbjct: 61  TPTVKAVELAGPLRAALDQLRATLEARD-FDPATADLTVTIACSDYIQAAVVMPLVVALR 119

Query: 121 EDAPNTDLRCVSLPHQQLEQALEQGSVDLAVGYFPDLQGEQVKTQALFEHNFTCIVRRNH 180
             AP   +    L    +EQ L  G  DL +   P      ++TQ LF   +  I RR H
Sbjct: 120 ARAPGVRVAVRHLMPDLIEQQLASGETDLVL-TTPRPTQAHLRTQHLFAETYVLIGRRGH 178

Query: 181 PSIGDTLSLEQFLAADHLVVNQE-GRSQEIFEQRLRELKLQRRVHLEVPHFMSVPQLIAS 239
           P +   LS+E +   +H++V+   G+ +   ++ L  L  +R V +    F+ +P+++A+
Sbjct: 179 PRLRRGLSIEDYAELEHVIVSPSGGQFRTPVDEGLAALGHRRSVVMSAASFLFIPEIVAA 238

Query: 240 TNMVATVPLSLGVWFASEQIKMLTPPIEVEKFELKLHWHRQMEDDPAVSWFRNAVFE 296
           +++VA VP  L +     ++ M+  P   E F++ L WH +        W R  + E
Sbjct: 239 SDVVALVPRRL-LRDPPARLVMIELPWLAEGFDVDLLWHERTHGHAGQRWLRALIAE 294