Pairwise Alignments

Query, 320 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 312 a.a., Nodulation protein d1 from Pseudomonas putida KT2440

 Score =  164 bits (416), Expect = 2e-45
 Identities = 99/299 (33%), Positives = 157/299 (52%), Gaps = 10/299 (3%)

Query: 1   MDIRRLDLNLLLLLDELYREQNLSAAARRLGMSQPMASASLRRLREYFEDQLFLSTGRGM 60
           M    LDLNLL+ LD L  EQN++ AA RL M+Q   S  L RLR +FED+L +  GR M
Sbjct: 1   MRFHHLDLNLLVALDILLEEQNITRAAERLHMTQSATSGVLGRLRTFFEDELLVQVGRKM 60

Query: 61  RPTPFTVSIAASVSGVLERIKHEILAKPAFQPRQSDRLFTISTSDIGALIFVPPILRRLG 120
           +PTP+ + +A  V  VL  I+  I AKP F P  S R F +  SD    +    +++++ 
Sbjct: 61  QPTPYALELAKPVREVLLTIRASITAKPVFDPAASKRHFRLVASDYLISVVFAQVIQKIH 120

Query: 121 EDAPNTDLRCVSLPHQQLEQALEQGSVDLAVGYFPD---LQGEQVKTQALFEHNFTCIVR 177
           ++AP      +  P     + L +G VD+ +   P+   ++G     Q LFE +  C+V 
Sbjct: 121 QEAPQITFEMIG-PGDSSAELLMRGEVDMMI--VPERYLIEGH--PAQLLFEEDHVCVVW 175

Query: 178 RNHPSIGDTLSLEQFLAADHLVVN-QEGRSQEIFEQRLRELKLQRRVHLEVPHFMSVPQL 236
           R++P +G+ L+LEQ++   H+ V     R   I +  + +    RR+ +    F ++PQL
Sbjct: 176 RDNPEVGEHLTLEQYMQMGHISVGFGRNRHLSIEDWFMNQYGFNRRLEVITNDFNTLPQL 235

Query: 237 IASTNMVATVPLSLGVWFASE-QIKMLTPPIEVEKFELKLHWHRQMEDDPAVSWFRNAV 294
           +  T  VAT+   L   +A    +++L PP+++      + WHR M+ DP   W R  +
Sbjct: 236 LVGTVRVATMHRRLAELYAGYLPLRLLPPPVKIPVMREFMLWHRSMDGDPMHRWLRERI 294