Pairwise Alignments

Query, 716 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

Subject, 712 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  412 bits (1059), Expect = e-119
 Identities = 255/715 (35%), Positives = 399/715 (55%), Gaps = 12/715 (1%)

Query: 7   SIQLKITLLAGLCLVGVVSLLMGLSLYRIEHNSDLVKFSSMKMLSDAAQSHIESQGEIQT 66
           SIQ  +  LAG  ++ VV++L+  +L+      ++V+  +        +  + +  + Q 
Sbjct: 5   SIQFSVAALAGAIVLSVVAVLVLYALFAGARTQEMVQDRTQVQFEQIIEQRLTALAQTQA 64

Query: 67  LIIRRQFTDAYQYGNGFSRHMQQLLLNQVENSPFQPSAFRESIVFQAKTVLQANPGLLGI 126
            +I+R+           +     L +   +  P    +  + I    +TV++ NP +LG 
Sbjct: 65  TLIQRELEAPLVTAKSLATANALLGMKDAKGEPALQVSREQLINLLHETVVR-NPKILGA 123

Query: 127 SLVFEPNALDGKDEIFVGNTALGSNDKGRFALNWTQSNTGQITSIVISENELDSAKNASS 186
            + +EPNA+D  D  +V +  +G    GRF   W ++  G +    +++       N  +
Sbjct: 124 YIGWEPNAIDHNDAAYVNSPIVGMAADGRFLPWWYRNADGSLGLDKLAD------VNDQN 177

Query: 187 INQNGTRNT----CSRSALKPCVFEPFFSRVNGQKTLVTSIVFPLLVDNKRVGSLLVDIS 242
           I   G R +    CS+   K C  +P   +V     ++ S + P+++D    G +  D+S
Sbjct: 178 ILSTGVRASEYYLCSKENKKACAIDPAPYKVGNAMVMLASFIEPIMIDGAFQGIVGADLS 237

Query: 243 LDGLQSVSQDTSRKLYEGQAGISVITPSGLLAGHSPDVRLVG-KYLNAIDSDDAAELVRL 301
           ++ +Q +     +KLY G   +++I+ +G L  ++ D   +G K  + +DS++   L +L
Sbjct: 238 VNFIQDMLTSADQKLYNGAGEMALISSNGRLVAYTKDASKLGEKASDLLDSNELTNLNQL 297

Query: 302 LNTEPGKHSLKGEARMKTLVTFEPIPDDAPWGVLLDIPESVLIEPAEVLRRQLDQRNTTG 361
              E      K    ++  + F     DA W ++L +P S ++  ++ L+  L+ +  T 
Sbjct: 298 KAGEVRYDIDKEHGHIELFLPFTIGQADARWTLMLQLPLSAVMADSQKLQSDLEAQRKTD 357

Query: 362 SLVELGLGLLAAIVGLLFIWMMARSVTKPILRVAYMLRDIASGDGNLTLRLAYEKQDELG 421
                  GLL A +GLL IW++   + +P+ ++  ML DIA G+G+LT RL  ++ DELG
Sbjct: 358 IFGMTIAGLLIAGIGLLVIWLVGHGIARPLKQMVAMLNDIAQGEGDLTRRLTSDRADELG 417

Query: 422 ELVAWFNSLLDKLQPTIAEVKRSVQAARATADESAAIARQTSNGMEEQSRQVHLVVTASQ 481
            +   FN+ L KLQ  I +V  SVQ    +++ +A IA +T+ G+ +Q  ++  V TA  
Sbjct: 418 AIANGFNTFLIKLQGMITQVVSSVQKVSDSSEHTADIAIRTNQGVHKQMVEIDQVATAVH 477

Query: 482 EMNATAQDVARSAAQAAKAACDADQATREGLSVIGRTTSSIDHLAADMSEAMSQVESLAT 541
           EM ATAQDVAR+A QAA+AA  ADQA  +G+ ++  T++SI  LA ++ +A+S V++LA 
Sbjct: 478 EMTATAQDVARNATQAAQAASHADQAASQGMRIVRDTSTSIGALAEEIGKAVSVVQTLAK 537

Query: 542 HSEKIGMVLEVIRSIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLARRTQESVEE 601
            SE I  +L  IR IAEQTNLLALNAAIEAARAGE GRGFAVVADEVRNLA++TQ++ EE
Sbjct: 538 DSENINAILTAIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAQKTQKATEE 597

Query: 602 TRIVIEHLQSGTESVVTAMSKSQRLASGSVDQVSQAVTALSQIGDAVTVITSMNLQIASA 661
            + +I+ LQ GT  VV  M  SQ     SV   ++A  AL  I  AV+VI  MN QIASA
Sbjct: 598 IQTMIQQLQQGTRDVVRVMEDSQSRTDESVQHAAKAAEALETITQAVSVINDMNTQIASA 657

Query: 662 AEEQNAVAEEINCNISIIRDVTESMSDRASESARISDSIYKLANQQQVLMNQFRV 716
           AEEQ+AVAE+IN N+  I  V   ++  A ES+  S  + KLA QQ+ L+NQF+V
Sbjct: 658 AEEQSAVAEDINRNVINIGQVANEVAGGADESSAASADLTKLAEQQRRLINQFKV 712