Pairwise Alignments

Query, 716 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

Subject, 712 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  615 bits (1587), Expect = e-180
 Identities = 338/714 (47%), Positives = 481/714 (67%), Gaps = 3/714 (0%)

Query: 3   FSKISIQLKITLLAGLCLVGVVSLLMGLSLYRIEHNSDLVKFSSMKMLSDAAQSHIESQG 62
           F  +SI+LKI LL+GLCL+GV++L++ ++LY    N  L+  SS +ML+ + QS ++S+ 
Sbjct: 2   FDTLSIRLKIVLLSGLCLLGVIALIISINLYETNQNDQLISDSSSRMLTSSVQSLLQSKA 61

Query: 63  EIQTLIIRRQFTDAYQYGNGFSRHMQQLLLNQVENSPFQPSAFRESIVFQAKTVLQANPG 122
             Q +++++ F +        +  ++ L     + +  +P A RE +    KT  + N  
Sbjct: 62  GEQAVLLQKTFGENLLVVTALADQVKDLRALAAKRA-LEPGALREELNQSLKTTFERNSK 120

Query: 123 LLGISLVFEPNALDGKDEIFVGNTALGSNDKGRFALNWTQSNTGQITSIVISENELDSAK 182
           +LGI L FEPN LDGKD  FV + A  SN+KGRF+  W+++    + +I++ ++   +  
Sbjct: 121 VLGIWLSFEPNGLDGKDSEFVDDKARVSNEKGRFSSYWSRAGGEGLNTIMVEDDLTKTTP 180

Query: 183 NASSINQNGTRNTCSRSALKPCVFEPFFSRVNGQKTLVTSIVFPLLVDNKRVGSLLVDIS 242
           N S    N    TC R   K C+ +P+   V G++ L+T+I  PL+VD   +G + +DI+
Sbjct: 181 NLSGTPYN-IWYTCPRDTRKVCLLDPYADEVAGKQMLMTTISLPLMVDGNVIGVVGIDIA 239

Query: 243 LDGLQSVSQDTSRKLYEGQAGISVITPSGLLAGHSPDVRLVGKYLNAIDSDDAAELVRLL 302
           L+ LQ+V+    ++L+ G A + +++ +GL+A  S    +VGK L      +  E+V+LL
Sbjct: 240 LNTLQAVTDAAQKELFNGAAHLDILSSTGLIAASSGQPEIVGKTLMDTVGAEGKEIVQLL 299

Query: 303 NTEPGKHSLKGEARMKTLVTFEPIPDDAPWGVLLDIPESVLIEPAEVLRRQLDQRNTTGS 362
            ++      + +  ++ +   +PI D   WGV++ +P +V++     L+  LD+    G+
Sbjct: 300 ASD-SPMIREQDHTIRAVYPVKPIADAKSWGVVVTLPRNVMLADTLKLQDVLDKAQAAGT 358

Query: 363 LVELGLGLLAAIVGLLFIWMMARSVTKPILRVAYMLRDIASGDGNLTLRLAYEKQDELGE 422
           L  L +G  AA++GLL IW+ A  VT+PI  VA ML+DIASGDG+LT RLAY K+DELGE
Sbjct: 359 LKALLVGAAAALLGLLLIWLTATGVTRPINNVAAMLKDIASGDGDLTQRLAYAKKDELGE 418

Query: 423 LVAWFNSLLDKLQPTIAEVKRSVQAARATADESAAIARQTSNGMEEQSRQVHLVVTASQE 482
           L  WFN  LDKLQPTIA++K+S+  AR TAD+S+AIARQTS GM+ Q R++  V TAS E
Sbjct: 419 LANWFNRFLDKLQPTIAQIKQSITEARGTADQSSAIARQTSEGMQVQFREIDQVATASNE 478

Query: 483 MNATAQDVARSAAQAAKAACDADQATREGLSVIGRTTSSIDHLAADMSEAMSQVESLATH 542
           M+ATA DVA SA+ AA AA  ADQ+ REG+S+I ++T  I  LA ++S+A+ +VE+LA +
Sbjct: 479 MSATAHDVANSASNAASAARGADQSAREGMSIIEQSTRDITSLAEEVSKAVGEVEALAVN 538

Query: 543 SEKIGMVLEVIRSIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLARRTQESVEET 602
           SE+IG VLEVIRSIAEQTNLLALNAAIEAARAGE+GRGFAVVADEVRNLA+RTQ+SVEE 
Sbjct: 539 SEQIGSVLEVIRSIAEQTNLLALNAAIEAARAGESGRGFAVVADEVRNLAKRTQDSVEEI 598

Query: 603 RIVIEHLQSGTESVVTAMSKSQRLASGSVDQVSQAVTALSQIGDAVTVITSMNLQIASAA 662
           R+VIE +QSGT  VV  M  SQ  A  +  Q+ QA  AL +I DAVTVI+ MNLQIASAA
Sbjct: 599 RLVIERIQSGTRGVVATMHSSQSQAQSNAGQIHQAAQALGKISDAVTVISDMNLQIASAA 658

Query: 663 EEQNAVAEEINCNISIIRDVTESMSDRASESARISDSIYKLANQQQVLMNQFRV 716
           E+Q+AVAEE+N N+S IR VTE+++ +A+ESA IS  +  LA+QQ  LM+QFRV
Sbjct: 659 EQQSAVAEEVNRNVSAIRTVTETLTGQATESAAISSQLNALASQQMKLMDQFRV 712