Pairwise Alignments

Query, 1085 a.a., putative helicase from Pseudomonas putida KT2440

Subject, 1137 a.a., Superfamily II DNA/RNA helicases, SNF2 family from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 46.6 bits (109), Expect = 1e-08
 Identities = 56/222 (25%), Positives = 86/222 (38%), Gaps = 26/222 (11%)

Query: 247 LWPSQRQGIAQALYLLDTVGAVLVADATGSGKTRMGAHLIRTIHDRNWSLARARKSSMLL 306
           L P Q+ G      L +     ++AD  G GKT     L+  +H +        K   L+
Sbjct: 677 LRPYQKAGFYWMKALQEEEWGGILADDMGLGKTLQVLTLL--LHTKE----TGGKQPNLI 730

Query: 307 ICPPLVRKNWDWETAKCGYNIAITSHGLLSRLNPEDE---SSLAIHLSSA---------- 353
           +    +  NW+ +TAK   N+ I  +   SR   + E     L I               
Sbjct: 731 VATKTLLYNWEEQTAKFTPNLTICKYYGQSRKKLQKELRHHDLIITTYDTVKSDIRFFGN 790

Query: 354 ---QILAVDEAHNFLNQGSRRTRTLKFNLADQVVLFTATPINRSIADLLRLIDILGADNF 410
              Q L  DEA    N G+ R + +    A   +  + TPI  S+ DL  L++ +    F
Sbjct: 791 MEFQYLITDEAQAIKNTGTDRYKAISLLNAQFRLALSGTPIENSVMDLYALMNFVNPGFF 850

Query: 411 DDDVLAVFERLTGFGHGGAETRDDDIPQLQAGIGSFVVRRTK 452
             +  A F  +  F   G   +   +  LQ  I  F++RRTK
Sbjct: 851 GTE--ANFRNI--FLEKGRVDKSPRMEALQTAIKPFILRRTK 888